DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and Smok2a

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_001178548.2 Gene:Smok2a / 292316 RGDID:1565233 Length:501 Species:Rattus norvegicus


Alignment Length:347 Identity:113/347 - (32%)
Similarity:187/347 - (53%) Gaps:36/347 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSLRHPHITRLYE 105
            |.:..|||.|..|.||||.:.:|.|.||:|::.|   .:::..:...|:.|:..:.||:|..|.:
  Rat    27 YLVLNTIGHGFHAAVKLAVHRLTGTPVAVKMLLK---RQQWCQQVTSEVEIMMRINHPNIVSLIQ 88

  Fly   106 VMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDLKAENVL 170
            |::::.:.||:.|.|...:::.|:...|.::|.||..:|.||:|||.|||..|::|||||.:|:|
  Rat    89 VIDTEKITYLIMELAKGNQLYSHIKEAGHLQEDEARGIFRQLLSAVGYCHEEGIIHRDLKPDNLL 153

  Fly   171 LDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLYALVCGA 235
            :|....||:.|||.:.....|..|:|..|:..::|||:..|..|:|||.|:|:|||:||.:..|.
  Rat   154 VDTKGRIKIIDFGSATQVRPGQKLRTPYGTYAFSAPELLLGKFYEGPKVDVWALGVILYYMTVGK 218

  Fly   236 LPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWLSEWQSEMQ 300
            :||:..:|..|:.::|||.:.:|..:|:|.:.|:..:|.|...:|.||..::.|.|| :..||  
  Rat   219 VPFEAASIPLLRRQIVLGTYVVPPGLSEELQDLLSLLLKVNSQQRPTIPDLLTHPWL-KIDSE-- 280

  Fly   301 EQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTADMIAQSVHEQRFDNI 365
                 |...|....:               |.:.|..::..|..: |..|..:..|:.:::|:..
  Rat   281 -----GFPQPCKELI---------------PLRPDPAILRAMQDI-GFEAQEVKDSLDQKKFNQS 324

  Fly   366 YAIYNLLHDKLQQRRRENQRLQ 387
            .|.|.||         |.|.||
  Rat   325 MACYYLL---------EKQALQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 92/250 (37%)
S_TKc 41..292 CDD:214567 92/250 (37%)
UBA_SIK 335..380 CDD:270523 10/44 (23%)
Smok2aNP_001178548.2 STKc_AMPK-like 26..274 CDD:270905 92/249 (37%)
UBA_MARK_Par1 294..333 CDD:270522 10/48 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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