DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and RGD1562638

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_001094414.1 Gene:RGD1562638 / 290818 RGDID:1562638 Length:654 Species:Rattus norvegicus


Alignment Length:779 Identity:208/779 - (26%)
Similarity:320/779 - (41%) Gaps:207/779 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSLRHPHITRLY 104
            :|.:..::|:|.|..||||::::|:||||||::.|:  |:..|.|:  ||.|:|||.||||.:|.
  Rat    23 HYRILASLGQGGFGEVKLASHLLTQTKVAIKVLPKS--NKNLLLKS--EIEIMKSLDHPHIIKLL 83

  Fly   105 EVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDLKAENV 169
            .::::...|::|.|:|..||:...:...|.:.|.|..|:|.|:|.|:.|||:||::|||:|.||:
  Rat    84 HIIDTNENIFIVLEHAVGGELLTRIEDFGYLPEEECNRLFRQMVLALQYCHQRGIIHRDIKPENI 148

  Fly   170 LLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLYALVCG 234
            |||...|:||:|||.|.....|..|.|.||:.||.|||:|....|||...|:||||||||.:..|
  Rat   149 LLDHKGNVKLSDFGLSTKIVMGQKLTTLCGTLPYCAPELFNLNGYDGQAIDVWSLGVVLYYMATG 213

  Fly   235 ALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWLSEWQSEM 299
            .|||.|.|...:|.:::.|::.:.|.:|.:...:|..:|.|.|..|..:.:|::..||.      
  Rat   214 CLPFQGFTYQAIKQKILSGRYSVNFRLSPDLWDVIAKLLTVNPRERPRVHEILRFNWLK------ 272

  Fly   300 QEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTADMIAQSVHEQRFDN 364
            .|.|               .|.||||..:||.|  |..::..|..: |.....|.:|:.|::||.
  Rat   273 NENE---------------VSPSSLGGNTDSHP--DPTILVMMGDM-GYEQGQIRESLRERKFDQ 319

  Fly   365 IYAIYNLL------HDKLQQRRRENQRLQHHASLAYSRSRKTSITTG-----VVDRSEPVKQESL 418
            :.|.|.:|      .||..:.....|..|...|...:..::|::..|     :.....|.|.|||
  Rat   320 VMATYLMLREKACSEDKSIKTPHPTQCAQTLKSTGSTTEKQTTLRRGSSLPTLTTFYLPSKLESL 384

  Fly   419 DR---------LSPLSNANASSSALGFGWSDVAVDLEKYGDFELECLARSNDPPVNAQHLSAHAG 474
            ::         :.|..|....|.:|..|...:              ::.:..|.:|..:.|....
  Rat   385 NKEKRTTMRHTMPPNLNCFNKSESLNKGRRTI--------------VSHTISPTLNCFNKSESLN 435

  Fly   475 GGVNGANTRRHTVGPGDVAHEQALANPNVPPIDFKCP-----------------PQCSDPTQPVP 522
            .|..  ...|||:.|           ....|:...||                 ...|||     
  Rat   436 KGKR--TIVRHTMPP-----------KKTSPVRRICPRLHKSFGMGSASEDSSKRNSSDP----- 482

  Fly   523 YYPVNLPMLQNQPLHNLTIKDQHLLKPPVVMGASSFGRRASDGGANLH--IYYPATGTVVGPAQG 585
                :|.:..:|..                |.|..:|...|...|.|.  ::|.|:         
  Rat   483 ----SLTIFSSQSF----------------MSAFKYGSTYSKRKAFLQCILHYHAS--------- 518

  Fly   586 QQMDTAGYYINP----NCGTDPLAVQELSPLNEQSVAQMQCCQENATGECNEELQSYMQKRGGTQ 646
            |:.|.....|.|    |....|.::||..|                ||..:..|           
  Rat   519 QEEDQYKTTIIPSGKLNTTVPPNSLQEDQP----------------TGHLHNVL----------- 556

  Fly   647 RHTVGCTEDLSVAHGSGAGSQSQAPTTSSNMRQRRTGLLTVTERPPVIPPEIIREVES-----RM 706
              |.|..::.::        |.::|..|:.        .|..|.|      .|:|.||     |.
  Rat   557 --TAGAVDNRNL--------QEKSPPFSTT--------ATKGEGP------AIKERESIPSSPRA 597

  Fly   707 KRDYLPPTLKSLSQSPPNGTY--PVGAALPMGMSKGLSPPHSLPLVAAAGGSVPLVAPNNRRIH 768
            .|:    ..:..||:||...:  .|...|..|..|||             ||:....|..:::|
  Rat   598 PRE----QFRGRSQTPPRAPFRRRVWKTLKSGFLKGL-------------GSLCCCLPIQKKVH 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 104/251 (41%)
S_TKc 41..292 CDD:214567 104/250 (42%)
UBA_SIK 335..380 CDD:270523 13/50 (26%)
RGD1562638NP_001094414.1 STKc_AMPK-like 23..270 CDD:270905 104/250 (42%)
UBA_MARK_Par1 290..329 CDD:270522 12/41 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..369 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..616 16/78 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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