DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik3 and F14H3.12

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_507047.2 Gene:F14H3.12 / 184497 WormBaseID:WBGene00008831 Length:142 Species:Caenorhabditis elegans


Alignment Length:131 Identity:25/131 - (19%)
Similarity:50/131 - (38%) Gaps:28/131 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1346 EMVKQTIDSTMPPKGFVLHKGSISSEDSGAESRHS-SASNASTSNP--LACEAASLLASHS---- 1403
            :...:|:.:.....||.|.  :...||.....|.: |....|...|  :..|...:|.|:.    
 Worm    18 QQASETLTAIRQRFGFALE--TADQEDQARAVRFTWSLKKTSMLEPDEILKEIQKVLESYGIDYE 80

  Fly  1404 ---------GYGEPTTNLSLEYSGGLQIELQVCEGRSRDHHGAGKGIKLRRISGDQFEYGKICQQ 1459
                     .:.:|.|:.|:::      :::||. ..|.:.   .|:..:||||...::..|..:
 Worm    81 QQKRYLLRCSHVDPLTDASVKW------DIEVCT-LPRLYL---NGVHFQRISGSSSDFKNITTK 135

  Fly  1460 L 1460
            :
 Worm   136 I 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864
UBA_SIK 335..380 CDD:270523
F14H3.12NP_507047.2 AMPKA_C_like 45..140 CDD:473060 19/102 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.