DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik3 and kin-29

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_508493.1 Gene:kin-29 / 180574 WormBaseID:WBGene00002210 Length:822 Species:Caenorhabditis elegans


Alignment Length:934 Identity:269/934 - (28%)
Similarity:407/934 - (43%) Gaps:229/934 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSLRHPH 99
            |.::|.|::.:.|||||||.|::|.:.:.|||||||.||.:.|:.|.|.|..||:.|:|.:.|||
 Worm    10 LEKIGLYDVGRAIGKGNFATVRIARHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVIDHPH 74

  Fly   100 ITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDL 164
            |.:.||:|...:|:|:|:||..:||:::.|:..||:.|..|.:.|::..|||.|.|.:|:|||||
 Worm    75 IVKSYEIMRVDNMLYIVSEYCSSGELYETLIEKGRVAENVARKWFSETASAVAYLHSQGIVHRDL 139

  Fly   165 KAENVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLY 229
            ||||:||.|:.|||:.||||||.......|.||||||||||||:..|..|||.|:||||:||:||
 Worm   140 KAENILLGKNSNIKIIDFGFSNFQTGDQLLNTWCGSPPYAAPELLLGNSYDGMKADIWSMGVLLY 204

  Fly   230 ALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWLSE 294
            .||.|..||...::.:||..|:.|..:||:::|.||...||.|||:.|.:||||:.:::|||: .
 Worm   205 ILVAGGFPFPSDSVNKLKRSVLSGLVKIPYWVSVECADFIRKMLVLNPGKRYTIQNVLQHRWM-H 268

  Fly   295 WQSEMQEQE--RFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTADMIAQSV 357
            .:.::|:.:  :..:..|.|....:..||           :|:..:|..|.|....:.:.|..:|
 Worm   269 IRDDVQKNQAAQLLEAIPSSSIEIRQQST-----------KLNPTIMMFMQQHGKWSEEQIIDAV 322

  Fly   358 HEQRFDN-IYAIYNLLHDKLQQRRRENQRLQHHASLAYSRSRKTSITTGVVDRSE-----PVKQE 416
            ..:.|:: |:|.|.||.||:::...|....:..     .|..:.||.:|..:..|     .:...
 Worm   323 LGRDFESPIFATYELLADKVKKGTLEGTGEEFP-----RRGSRGSILSGKANVDEQPLTPTISAH 382

  Fly   417 SLDRL---SPLSNANASSSALGFGWSDVAVDLEKYGDFELECLARSNDPPVNAQHLSAHAGG--- 475
            .|.:|   ||..:::.||:      ||:..|           ...|:..|:|.:.......|   
 Worm   383 QLAQLNLSSPDCDSDDSSN------SDLCDD-----------SPMSSMGPMNHERQFGTPHGLDI 430

  Fly   476 -GVNGANTRRHTVGPGDVAHEQALANPNV-----------------PPIDFKCPPQCSDPTQPVP 522
             | |....||||:    .|.|| |.:||:                 ||:.|  ||.   |.....
 Worm   431 IG-NRFENRRHTL----CASEQ-LLSPNMMGQFPPPNLLLNNFSMNPPLGF--PPM---PEGQAA 484

  Fly   523 YYPVNLPMLQNQPLHNLTIKDQHLLKPPVVMGASSFGRRASDGGANLHIYYPATGTVVGPAQGQQ 587
            .:|  ||.| :.....:.|.|...:.|     .....||||.|...|...:..            
 Worm   485 EFP--LPSL-HPAFATIPIADLSKMLP-----VPKSERRASAGETLLPTNFDL------------ 529

  Fly   588 MDTAGYYINPNCGTDPLAVQELSPLNEQSVAQMQCCQENATGECNEELQSYMQKRGGTQRHTVGC 652
                         |..||.....|::..:|              .||.:||:.|.|| :|:||.|
 Worm   530 -------------TQHLANLPAPPISFPTV--------------EEEGKSYLSKYGG-KRNTVHC 566

  Fly   653 TEDLSVAHGSGAGSQSQAPTTSSNMRQRRTGLLTVTERPPVIPPEIIREVESRMKRDYLPPTLKS 717
                 :.:..|.|.|:..|      |.:||   ..|:.||           :..:..:..|:|.:
 Worm   567 -----LGNQLGGGIQNPIP------RYQRT---PYTKAPP-----------AERRSSWASPSLSA 606

  Fly   718 LSQSPPNGTYPVGAALPMGMS------KGLSPPHSLPLVAAAGGSVPLVAPN-------NRRIHR 769
            ..|:.....:.........|:      ||||...:...:...|.|  |..|.       ||:   
 Worm   607 QQQNHLEKLFKQALQTNNDMTRLHKEFKGLSHGCAQSQITNEGSS--LACPQISITDEYNRQ--- 666

  Fly   770 VVHSKLPTVQEGATIGRYSPV----RRASE------------GSKSQFQG---PLQECQSLQKGI 815
              |:..|:...      :.||    :.|.|            .|.:.|.|   |.|..:|:...:
 Worm   667 --HNIAPSASS------FDPVSIFQKNAQEVVFGQRPATAIGFSSTSFSGMSTPEQTTRSIDDRV 723

  Fly   816 AQRNFLVAPSPPLLE---------NSISLPGSPIHG---KPGMG--LQLALRRGHDIEV---PPE 863
            ..    :..:.|..|         |.:.:|.|..|.   :|.:.  .:|:|..|.:|.|   |||
 Worm   724 RS----IVCTLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIGVAVLPPE 784

  Fly   864 AIKNLMPALDRLVKEQRVSFEIAN 887
                         .:..|.|.|.|
 Worm   785 -------------HKAHVEFAIIN 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 126/251 (50%)
S_TKc 41..292 CDD:214567 126/250 (50%)
UBA_SIK 335..380 CDD:270523 13/45 (29%)
kin-29NP_508493.1 PKc_like 16..267 CDD:304357 126/250 (50%)
S_TKc 16..267 CDD:214567 126/250 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.