DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik3 and Mark3

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_006515574.1 Gene:Mark3 / 17169 MGIID:1341865 Length:806 Species:Mus musculus


Alignment Length:813 Identity:256/813 - (31%)
Similarity:362/813 - (44%) Gaps:217/813 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSLRH 97
            |:...:|.|.|.|||||||||.||||.:|:|..:|||||||||.||...|.|.|||:.|:|.|.|
Mouse    48 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 112

  Fly    98 PHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHR 162
            |:|.:|:||:|::..:||:.|||..||:||:|||:|||||.||...|.|:||||.|||::.:|||
Mouse   113 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHR 177

  Fly   163 DLKAENVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVV 227
            ||||||:|||.|||||:|||||||.:..|:.|.|:||||||||||:|||.:||||:.|:|||||:
Mouse   178 DLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 242

  Fly   228 LYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWL 292
            ||.||.|:|||||:.:.||:.||:.||:||||:||.:||.|::..||:.|.:|.|::||:|.||:
Mouse   243 LYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWI 307

  Fly   293 SEWQSEMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSV------VMTHMLQLPGLTAD 351
            :....| .|.:.|.:                        |:||..      :|..|    |.:.:
Mouse   308 NAGHEE-DELKPFVE------------------------PELDISDQKRIDIMVGM----GYSQE 343

  Fly   352 MIAQSVHEQRFDNIYAIYNLLHDKLQQRRRENQRLQHHASLAYSRSRKTSITTGVVDRSEPVKQE 416
            .|.:|:.:.::|.|.|.|.||..|..:....:.....:.|||..|..                  
Mouse   344 EIQESLSKMKYDEITATYLLLGRKSAELDASDSSSSSNLSLAKVRPN------------------ 390

  Fly   417 SLDRLSPLSNANASSSALGFGWSDVAVDLEKYGDFELECLARSNDPPVNAQHLSAHAGGGVNGAN 481
                 |.|||:...|.             ...|.       ||.......:..|.|||       
Mouse   391 -----SDLSNSTGQSP-------------HHKGQ-------RSVSSSQKQRRYSDHAG------- 423

  Fly   482 TRRHTVGPGDVAHEQALANPNVPPIDFKCPPQCSDPTQPVPYYPVNLPMLQNQPLHNLTIKDQHL 546
                               |.:|.:                   |..|........:..:|:..:
Mouse   424 -------------------PAIPSV-------------------VAYPKRSQTSTADSDLKEDGI 450

  Fly   547 LKPPVVMGASSFGRRASDGGANLHIYYPATGTVVGPAQGQQMDTAGYYINPNCGTDPLAVQELSP 611
              |.....:|:.|                 |..:.|| ...:..||   |||....|  .::.||
Mouse   451 --PSRKSSSSAVG-----------------GKGIAPA-SPMLGNAG---NPNKADIP--ERKKSP 490

  Fly   612 LNEQSVAQMQCCQENATGECNEELQSYMQKRGGTQRHTV---GCTEDLSVAHGSGAGSQSQAPTT 673
            ....|        ..|:|...........:|....||:|   |....|:......|...|...|:
Mouse   491 AVPSS--------NTASGGMTRRNTYVCSERCAADRHSVIQNGKENSLTEVFAYAASPASLCATS 547

  Fly   674 SSNMRQRRTGLLTVTERPPVIPPEIIREVESRMKRDYLPPTLKSLS----QSPPNGTYPVGAA-- 732
            :..:|.:|:..::.:..|.::.|.|..|.:          |.|:::    ::|...|:.:.:|  
Mouse   548 TCRLRHQRSMSVSASGHPKMVLPPIDSEGD----------TFKAIAIPDERTPVASTHSISSATT 602

  Fly   733 -----LPMGMSKGLS---------------PPHSLPLVAAA--------GGSVPLVAPNNRRIHR 769
                 .|.|.:...:               ||.|..|...|        .||..|.:....::.|
Mouse   603 PDRIRFPRGTASRSTFHGQPRERRTATYNGPPASPSLSHEATPLSQTRSRGSTNLFSKLTSKLTR 667

  Fly   770 VVHS-----KLPTVQEGATIGRYSPVRRASEGS 797
            ...|     :|||..|  ..|||       |||
Mouse   668 RNMSFRFIKRLPTEYE--RNGRY-------EGS 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 155/251 (62%)
S_TKc 41..292 CDD:214567 155/250 (62%)
UBA_SIK 335..380 CDD:270523 13/50 (26%)
Mark3XP_006515574.1 STKc_MARK 55..307 CDD:270974 155/251 (62%)
UBA_MARK3_4 325..367 CDD:270590 12/45 (27%)
MARK1-3_C 707..804 CDD:213381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5061
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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