DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik3 and Mark1

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_038946210.1 Gene:Mark1 / 117016 RGDID:619882 Length:794 Species:Rattus norvegicus


Alignment Length:848 Identity:261/848 - (30%)
Similarity:385/848 - (45%) Gaps:225/848 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PPT-SSTPQNYKVP---STSKISVDKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIID 73
            ||| ||:.||  :|   ::...:.|:...:|.|.|:|||||||||.||||.:::|..:||:||||
  Rat    30 PPTKSSSRQN--IPRCRNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIID 92

  Fly    74 KTCLNEEYLNKTFREIAILKSLRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEP 138
            ||.||...|.|.|||:.|:|.|.||:|.:|:||:|::..:|||.|||..||:||:|||:|||||.
  Rat    93 KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 157

  Fly   139 EAARVFTQLVSAVHYCHRRGVVHRDLKAENVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPY 203
            ||...|.|:||||.|||::.:|||||||||:|||.|||||:|||||||.:..|..|.|:||||||
  Rat   158 EARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPY 222

  Fly   204 AAPEVFQGLEYDGPKSDIWSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQL 268
            ||||:|||.:||||:.|:|||||:||.||.|:|||||:.:.||:.||:.||:|:||:||.:||.|
  Rat   223 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYMSTDCENL 287

  Fly   269 IRNMLVVEPDRRYTIKQIIKHRWLSEWQSEMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQ 333
            ::.:||:.|.:|.:::||:|.||::....| :|.:.:                        |.|:
  Rat   288 LKKLLVLNPIKRGSLEQIMKDRWMNVGHEE-EELKPY------------------------SEPE 327

  Fly   334 LD-------SVVMTHMLQLPGLTADMIAQSVHEQRFDNIYAIYNLLHDKLQQRRRENQRLQHHAS 391
            ||       .:::|     .|...|.|..::..|::|.:.|.|.||       .|:....:...|
  Rat   328 LDLNDAKRIDIMVT-----MGFARDEINDALVSQKYDEVMATYILL-------GRKPPEFEGGES 380

  Fly   392 LAYSRSRKTSITTGVVDRSEPVKQESLDRLSPLSNANASSSALGFGWSDVAVDLEKYGDFELECL 456
            |:         :..:..||.|        .|.|:|:...|.|                  .|: :
  Rat   381 LS---------SGNLCQRSRP--------SSDLNNSTLQSPA------------------HLK-V 409

  Fly   457 ARSNDPPVNAQHLSAHAGGGVNGANTRRHTVGPGDVAHEQALANPNVPP-IDFKCPPQCSDPTQP 520
            .||.......:..|.|||                          |::|| :.:...||.:     
  Rat   410 QRSISANQKQRRFSDHAG--------------------------PSIPPAVSYTKRPQAN----- 443

  Fly   521 VPYYPVNLPMLQNQP--------LHNLTIKDQHLLKPPVVMGASSFGRRASDGGANLHIYYPATG 577
                  ::...|.:.        |.:.|:..:..:....::|..   |:.|..|.:.::|     
  Rat   444 ------SVESEQKEEWDKDTARRLGSTTVGSKSEVTASPLVGPD---RKKSSAGPSNNVY----- 494

  Fly   578 TVVGPAQGQQMDTAGYYINPNC--GTDPLAVQELSPLNEQSVAQMQCCQENATG----ECNEELQ 636
                  .|..|.....|:   |  .||..|.  |....:.|:.:|.....::||    ......:
  Rat   495 ------SGGSMTRRNTYV---CERSTDRYAA--LQNGRDSSLTEMSASSMSSTGSTVASAGPSAR 548

  Fly   637 SYMQKRGGTQRHTVGCTEDLSVAHGSGAGSQSQAPTTSSNMRQRRTGLLTVTERPPVIPPEIIRE 701
            ...||...|..|.:..|                .||........|.|  :..:|.|.        
  Rat   549 PRHQKSMSTSGHPIKVT----------------LPTIKDGSEAYRPG--STAQRVPA-------- 587

  Fly   702 VESRMKRDYLPPTLKSLSQSPPNGTYPVGAALPMGMSK--------------------GLSPPHS 746
                     ..|:..|:|.|.|:.|     ..|.|.|.                    ..||.|.
  Rat   588 ---------ASPSAHSISASTPDRT-----RFPRGSSSRSTFHGEQLRERRSAAYSGPPASPSHD 638

  Fly   747 LPLVAAA--GGSVPLVAPNNRRIHRVVHSKLPTVQEGATIGRYSPVRRASEGSKSQFQGPLQECQ 809
            ...:|.|  |.|..:::....:..|    :.|:  ||...||....|.:|...|.:.:|...:.:
  Rat   639 TAALAHARRGTSTGIISKITSKFVR----RDPS--EGEASGRTDTARGSSGEPKDKEEGKEAKPR 697

  Fly   810 SLQ 812
            ||:
  Rat   698 SLR 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 152/251 (61%)
S_TKc 41..292 CDD:214567 152/250 (61%)
UBA_SIK 335..380 CDD:270523 11/51 (22%)
Mark1XP_038946210.1 STKc_MARK 59..311 CDD:270974 152/251 (61%)
UBA_MARK1 331..371 CDD:270588 10/51 (20%)
MARK1-3_C 695..792 CDD:213381 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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