DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and mark2b

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_009301419.1 Gene:mark2b / 100005996 ZFINID:ZDB-GENE-080215-4 Length:790 Species:Danio rerio


Alignment Length:794 Identity:256/794 - (32%)
Similarity:366/794 - (46%) Gaps:160/794 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ATTPTAGPAAAPPTSSTPQNYKVPSTSKISVDKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTK 66
            :::.|...|.....||.|:.....:|:    ::...:|.|.|.|||||||||.||||.:::|..:
Zfish    14 SSSQTHSDAKGGVRSSAPRCRNAVATA----EEYPHIGNYRLLKTIGKGNFAKVKLARHVLTSKE 74

  Fly    67 VAIKIIDKTCLNEEYLNKTFREIAILKSLRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVA 131
            ||:||||||.||...|.|.|||:.|:|.|.||:|.:|:||:|:...:|||.|||..||:||:|||
Zfish    75 VAVKIIDKTQLNSSSLQKVFREVRIMKLLNHPNIVKLFEVIETDKTLYLVMEYASGGEVFDYLVA 139

  Fly   132 NGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDLKAENVLLDKDMNIKLADFGFSNHYEEGATLKT 196
            :|||||.||...|.|:||||.|||::.:|||||||||:|||.|||||:|||||||.:..|..|.|
Zfish   140 HGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDT 204

  Fly   197 WCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFM 261
            :||||||||||:|||.:||||:.|:|||||:||.||.|:|||||:.:.||:.||:.||:||||:|
Zfish   205 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 269

  Fly   262 SQECEQLIRNMLVVEPDRRYTI-KQIIKHRWLSEWQSEMQEQERFGDMSPGSGTVSKSASTSSLG 325
            |.:||.|::..|::.|.:|.:: :||:|.||::....:       .|:.|               
Zfish   270 STDCENLLKKFLILNPTKRGSLEQQIMKDRWMNVGYED-------DDLKP--------------- 312

  Fly   326 SASDSPPQLDSVVMTHMLQLPGLTADMIAQSVHEQRFDNIYAIYNLLHDKLQQRRRENQRLQHHA 390
            .....|...|......|||: |.:.:.|..|:.:|:::.:.|.|.||..:       |..|....
Zfish   313 YIEPQPDYKDPRRTDIMLQM-GFSQEEIEDSLVKQKYNEVMATYLLLDYR-------NSELDEGV 369

  Fly   391 SLAYSRSRKTSITTGVVDRSEPVKQESLDRLSPLSNANASSSALGFGWSDVAVDLEKYGDFELEC 455
            :|:.              :|.|.        |.|:|:||.|.                 ..:::.
Zfish   370 NLSL--------------KSRPG--------SDLTNSNAPSP-----------------PHKVQR 395

  Fly   456 LARSNDPPVNAQHLSAHAGGGVNGANTRRHTVGPGDVAHEQALANPNVPP---IDFKCPPQCSDP 517
            ...|...|...............|.|  :|  |..|...:.:.::..|||   |..:.....:..
Zfish   396 SVSSTQKPARRSTDQGSYSKRPQGEN--KH--GVEDSGRKGSSSSTKVPPSPVISSERKKSSTPS 456

  Fly   518 TQPVPYYPVNLPMLQNQPL-HNLTIKDQH----LLKP----------PVVMGASSFGR------- 560
            |..:  ........:|.|: ...|:..|:    |..|          ||:..:||..|       
Zfish   457 TNSI--LSTGTSRSRNSPISERATLGVQNGKDSLSTPGSRASTASAGPVLSSSSSSSRTRHHKSL 519

  Fly   561 --RASDGGANLHIYYPATGTVVGPAQGQQMDTAGYYINPNCGTD----PLAV--QELSPLNEQSV 617
              .|....|:||.:.|:.    .|.:......:.:.|:...|||    |..|  :....|.:|..
Zfish   520 STSAHPSPADLHSHRPSD----PPQRAPGASPSAHNISSAAGTDRTNFPRGVPTRNTFHLGQQRG 580

  Fly   618 AQMQCCQENATGECNEELQSYMQKRGGTQRHTVGCTEDLSVAHGSGAGSQSQAPTTSSNMRQ--- 679
            |:.|                     .|:..|  |.....|::||:   ||.:.|..|....:   
Zfish   581 ARDQ---------------------QGSPYH--GAPASPSLSHGN---SQQRRPAASGIFSKFTS 619

  Fly   680 ---RRTGLLTVTERPPVI-------PPEIIREVESRMKRDYLP-PTLKSLSQSPPNGTYPVGAAL 733
               ||........|.|..       ...::...|...|....| ...|..|.||..||.|   |.
Zfish   620 KFVRRNLSFRFPRRSPYEGEGQEEGSRSMLSSAEKSEKTSVGPEDENKDPSSSPGGGTPP---AA 681

  Fly   734 PMGMSKGLSPPHSL 747
            |:...|..|.|.||
Zfish   682 PVSSLKDQSKPRSL 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864 152/252 (60%)
UBA_SIK 335..380 CDD:270523 12/44 (27%)
mark2bXP_009301419.1 STKc_MARK 48..301 CDD:270974 152/252 (60%)
UBA_MARK2 319..360 CDD:270589 12/41 (29%)
AMPKA_C_like 691..789 CDD:473060 3/5 (60%)

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