DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment edl and Ets21C

DIOPT Version :9

Sequence 1:NP_523786.2 Gene:edl / 37149 FlyBaseID:FBgn0023214 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster


Alignment Length:116 Identity:31/116 - (26%)
Similarity:49/116 - (42%) Gaps:24/116 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SASSAISSTSNSSDDNNNRLMSADDGTTSLLHPLGSDGLPLDPRDWTRADVWKWLINMAVSEGLE 126
            |...|.|...||||.|.:            :.|:   .:|:||..||..|:..|:........|:
  Fly   123 SPHQAPSPRRNSSDSNRS------------VSPV---EVPVDPHAWTPEDIASWVRWATRKFKLD 172

  Fly   127 VTAELPQKFPMNGKALC-LMSLDMYLC----RVPVGGKMLYRDFRVRLARA 172
            ...:: .:||.:.:.|| |...|.::|    |   ||.:|.:.|.:.|..|
  Fly   173 PEPDI-DRFPKDAQELCDLSRADFWVCAGSRR---GGMLLAQHFAISLYHA 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edlNP_523786.2 SAM_PNT-Mae 103..170 CDD:176086 19/71 (27%)
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876 19/71 (27%)
ETS 254..339 CDD:197710
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11849
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.