DRSC/TRiP Functional Genomics Resources

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Protein Alignment edl and Ets1

DIOPT Version :10

Sequence 1:NP_523786.2 Gene:edl / 37149 FlyBaseID:FBgn0023214 Length:177 Species:Drosophila melanogaster
Sequence 2:XP_017450940.1 Gene:Ets1 / 24356 RGDID:2583 Length:529 Species:Rattus norvegicus


Alignment Length:107 Identity:31/107 - (28%)
Similarity:44/107 - (41%) Gaps:31/107 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VTLISASS------AISSTSNSSDDNNNRLMSADDGTTSLLHPLGSDGLPLDPRDWTRADV--W- 113
            |.|::.||      |:.:|.:.......||                 |:|.|||.||...|  | 
  Rat   122 VPLLTPSSKEMMSQALKATFSGFTKEQQRL-----------------GIPKDPRQWTETHVRDWV 169

  Fly   114 KWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP 155
            .|.:|....:|::.     |||.|||.|||.:..:.:|...|
  Rat   170 MWAVNEFSLKGVDF-----QKFCMNGAALCALGKECFLELAP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edlNP_523786.2 SAM_PNT-Mae 103..170 CDD:176086 21/56 (38%)
Ets1XP_017450940.1 SAM_PNT-ETS-1 139..226 CDD:176092 26/90 (29%)
Ets1_N_flank 235..422 CDD:466113
ETS 422..506 CDD:197710
Blue background indicates that the domain is not in the aligned region.

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