DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment edl and ehf

DIOPT Version :10

Sequence 1:NP_523786.2 Gene:edl / 37149 FlyBaseID:FBgn0023214 Length:177 Species:Drosophila melanogaster
Sequence 2:XP_002937335.2 Gene:ehf / 100493880 XenbaseID:XB-GENE-853705 Length:294 Species:Xenopus tropicalis


Alignment Length:101 Identity:24/101 - (23%)
Similarity:45/101 - (44%) Gaps:13/101 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 NRLMSADDGTTSLLH-PLGSDGLP------------LDPRDWTRADVWKWLINMAVSEGLEVTAE 130
            |.:|:.:.||..|:| |..::..|            :.|:.|::..||:||..:..:..|:....
 Frog     6 NSIMNINHGTNPLVHQPAWNNPYPPCDGYFGGQWHDIHPQYWSKFQVWEWLQQLVDTNQLDANCI 70

  Fly   131 LPQKFPMNGKALCLMSLDMYLCRVPVGGKMLYRDFR 166
            ....|.:.|:.||.|:|..:.......|.:||.:.:
 Frog    71 PFHDFDIAGEHLCNMTLPDFTQAAGSAGHILYNNLQ 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edlNP_523786.2 SAM_PNT-Mae 103..170 CDD:176086 16/64 (25%)
ehfXP_002937335.2 SAM_superfamily 36..113 CDD:472832 16/71 (23%)
ETS 200..287 CDD:197710
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.