DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gint3 and ubxn6

DIOPT Version :10

Sequence 1:NP_611356.1 Gene:Gint3 / 37148 FlyBaseID:FBgn0034372 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001005818.1 Gene:ubxn6 / 448295 XenbaseID:XB-GENE-971811 Length:427 Species:Xenopus tropicalis


Alignment Length:460 Identity:153/460 - (33%)
Similarity:250/460 - (54%) Gaps:56/460 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKKFFSRKKAEAAFKLNLTGSGMGTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEAR-AAA 67
            :|||....|::..||      |.|.||||:...:|..:..::::.:...||     :.||: |||
 Frog     1 MKKFLDGLKSDIKFK------GAGPGHKLSEDTRENVAKVTKEQVKPRKPP-----TGEAQIAAA 54

  Fly    68 SAALARIDKKTSREFNTSLSAVKAQAKRELEAER---RQREEAMGTPSTTSTSTSASGGDTRNLA 129
            |||:||::....|        .|.|:|......:   .|:||:...|....|:...|..     .
 Frog    55 SAAMARMESLQGR--------TKVQSKDTTTGRKEMIEQKEESNVGPKDIGTTRKKSSS-----V 106

  Fly   130 CEGVFFRCPLISEEILPKSVWKVRIKEFLYQQLEADRGLTACLIIHNCNV-KEKADECIATLIRY 193
            |. |.||||| ::|:|.|...:..|:..|.:....|....|.|.||..|. :||......|:.:|
 Frog   107 CT-VLFRCPL-TDELLRKEEREGHIRNVLQRLSTTDPTSAAILKIHTYNKDREKVKLGTETIAKY 169

  Fly   194 LENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQIDGEPFLLWTKEQTE---- 254
            :.|:|.:|||||:|:|::|||:|.||:..:||:.:..:|.||.:..:.|:..      |.|    
 Frog   170 MNNIISHPEEEKYCRIKLSNKVFQEKISCLEGSHEFFEAVGFEKKTMPGQDL------QEEFFVL 228

  Fly   255 -----KDLD-LPTLVEALKSSEIIPLELDRNIKVLLPS-QACRVALPDEFYRLSPEEIKKEQQLR 312
                 |:|| |....:||.|:|.:.|.|:|.:::.:|| :|....|||:|:.|:.||||:||:.|
 Frog   229 GGDALKNLDALHGHCDALLSAEPLRLSLERQLRIFMPSIEAAHFDLPDDFFNLTAEEIKREQRER 293

  Fly   313 SEAIAQSQMLRTKAMREREEQRNLRMYRYALVRVKFPNGLFIQGTFNVYEKISDVFEFVQSCLAD 377
            :|.:.::.:|||||||||||||.::.|.|.::|:|.|:|..:||.|...|::|.:|:|::..|.:
 Frog   294 TEMVERNAVLRTKAMREREEQREMKKYNYTVLRIKLPDGYILQGIFFARERVSALFDFLREQLQN 358

  Fly   378 ESLDFSLVSNSDGKLGDEDLEKTLYDCKLIPNTLLLF------SANDTPAPLQTDINYLKEDLLM 436
            :.|.|.|::....|:.:|  :.||.:|.|:|:.||.|      .|:......|:.::.:|.:||.
 Frog   359 DWLPFELLAPGGHKVENE--QATLIECGLVPSALLTFRWDEAVMADVEAGGGQSSVSVIKPELLS 421

  Fly   437 LVQAM 441
            .|:.:
 Frog   422 KVEQL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gint3NP_611356.1 PUB_UBXD1 171..268 CDD:198418 37/107 (35%)
UBX_UBXN6 341..415 CDD:340536 26/79 (33%)
ubxn6NP_001005818.1 PUB_UBXD1 146..249 CDD:198418 37/108 (34%)
UBX_UBXN6 322..394 CDD:340536 25/73 (34%)

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