DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gint3 and ubxn-6

DIOPT Version :9

Sequence 1:NP_611356.1 Gene:Gint3 / 37148 FlyBaseID:FBgn0034372 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_500648.2 Gene:ubxn-6 / 177253 WormBaseID:WBGene00019163 Length:437 Species:Caenorhabditis elegans


Alignment Length:440 Identity:135/440 - (30%)
Similarity:215/440 - (48%) Gaps:49/440 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIKKFFSRKKAEAAFKLNLTGSGMGTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEARA 65
            |:..|||.::|:.:..||.:..|..:.:|...:.|.....::...|            |...|.|
 Worm     1 MNSFKKFLNKKRVQNHFKKSGEGVRLSSGESSSQPSAHAGAAQGGQ------------IDRVAAA 53

  Fly    66 --AASAALARIDKKTSREFNTSLSAVKAQAKRELEAERRQREEAMGTPSTTSTSTSASGGDTRNL 128
              ||.||..|:.|...:: |.....::..||||||.||||.|:.    :.:.||:.......::|
 Worm    54 DIAAQAAFKRMQKNEPQQ-NAGKRRIQMIAKRELEEERRQVEDL----NISGTSSLQQPDREQHL 113

  Fly   129 ----ACEGVFFRCPLISE-EILPKSVWKVRIKEFLYQQL-----EADRGLTACLIIHNCNVKEKA 183
                |...|.:...|:.| .|..|:.....||.||..|:     |.|:.:.|.|::::.|.|...
 Worm   114 EHSSAISRVLYTSELLGEHHIRSKADLLEDIKNFLSDQISEADDENDKVIAAVLMLYSLNKKHPK 178

  Fly   184 DECIATLIRYLENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQIDGEPFLLW 248
            :..|.|:.:|.:|::::|.|:|:..||:.||.|.|:|..|.|....|:|.||.|.....:.||::
 Worm   179 ETAIETICKYCQNILEHPGEDKYKSIRLGNKAFQERVASVVGGRAFLEAVGFTEKSEGEDKFLVF 243

  Fly   249 TKEQTEKDLDLPTLVEALKSSEIIPLELDRNIKVLLPSQACRVALP---DEFYRLSPEEIKKEQQ 310
            ||   ..|:.|...:||||..:.:|:::.||:::....:..:...|   |:||.||..|:|.||:
 Worm   244 TK---PSDVHLVEALEALKDGQAVPIKVARNLEIFKLKEGQKPKAPKLADDFYNLSTAELKAEQR 305

  Fly   311 LRSEAIAQSQMLRTKAMREREEQRNLRMYRYALVRVKFPNGLFIQGTFNVYEKISDVFEFVQSCL 375
            .:...:.:...||||.||:::||.....|:|.|:||:.|..|.:||.|..:|..|.|..||.|.|
 Worm   306 NKEMQVERMLTLRTKEMRQKDEQMTNYRYKYTLIRVRLPGNLLMQGVFGCHEPFSAVRVFVASTL 370

  Fly   376 ADESLDFSLVSNSDGKLGD------EDLEKTLYDCKLIPNTLL--LFSAN 417
            :|      .:|.|:..|.|      ||...:|....|.|..||  :|:.|
 Worm   371 SD------ALSTSEFTLRDAASQLVEDESASLAQLSLAPAALLHVVFAEN 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gint3NP_611356.1 PUB_UBXD1 171..268 CDD:198418 33/96 (34%)
UBQ 341..414 CDD:294102 28/80 (35%)
ubxn-6NP_500648.2 PUB_UBXD1 166..262 CDD:198418 34/98 (35%)
UBQ 334..410 CDD:320785 29/81 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158677
Domainoid 1 1.000 54 1.000 Domainoid score I7533
eggNOG 1 0.900 - - E1_KOG2699
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11538
Inparanoid 1 1.050 176 1.000 Inparanoid score I2697
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006526
OrthoInspector 1 1.000 - - oto18921
orthoMCL 1 0.900 - - OOG6_106206
Panther 1 1.100 - - LDO PTHR23153
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4113
SonicParanoid 1 1.000 - - X5502
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.830

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