DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30122 and hnrnpul2

DIOPT Version :9

Sequence 1:NP_001163196.1 Gene:CG30122 / 37146 FlyBaseID:FBgn0050122 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_012816728.1 Gene:hnrnpul2 / 734041 XenbaseID:XB-GENE-492973 Length:764 Species:Xenopus tropicalis


Alignment Length:1030 Identity:260/1030 - (25%)
Similarity:389/1030 - (37%) Gaps:362/1030 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KMKVVDLRNELQSRGLDTKGVKAVLVERLRAYVEGG--AGDGENAPVTPSRRQRRTRSMSRSPSP 70
            :|||.:||.|||.|||:::|:||.|.|||:..::..  .||.|....                  
 Frog     8 RMKVTELRAELQRRGLESRGLKAELCERLQEALDSELLGGDEEKGAF------------------ 54

  Fly    71 VQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEPEPEQSEPEEAEPAAAVTEDTTVNQA 135
            :|......|.:...|.:||.         |.|......|.|.|...|.|.|..||...|..    
 Frog    55 IQEMAGGDEELALELGDEED---------EEEMLHEGQEDEEEDFNPNEVEAVAAQENDAV---- 106

  Fly   136 VNEESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPMEEDHDAAPEEQEPTQTEEPVEE 200
                  |..::.:|  |||.:.|.||   |..|.:.|.:|..:|..:.||      ::|:     
 Frog   107 ------PVKKQLEE--ETDSQAEKIE---PPPVVEEEESDMGVESLNGAA------SKTD----- 149

  Fly   201 KPAESTVAEHQSNGDSQKMDVDEEDSAAPKTAEETEPAAKPEDQPPERRKRSHSRSKSRSRSGSR 265
             |.:|...|   .||.:|.:          |||.::...:..|          |||....|.|.:
 Frog   150 -PGDSVAEE---CGDEEKSE----------TAESSQNKVELAD----------SRSSEPKRYGVK 190

  Fly   266 SSKHRGSVGD-----KRESKAAAEERTVP--EDEPTIEENKVGLSWLDSDLHLRIDPTTFASAKP 323
            ..:.....|.     |.|:..:..:..||  |::..::||.|.|..|..||.|::|...| ..:|
 Frog   191 RIREDEQNGRTYHEFKEEAYYSRSKSPVPPEEEDSEVDENIVCLDKLTCDLQLKLDKDQF-GGRP 254

  Fly   324 LTSEIYSLIWSGARANYGVREGKVCFEVRLSEESVPENSHYFRDEPHVRG------FRVGFSMPK 382
            |..|.:..:|||:||.:||.:|||.||::::|           :.|...|      .|||:|:.:
 Frog   255 LFYEKFPSLWSGSRATHGVTKGKVYFEIKVTE-----------NLPQKEGCTETPLLRVGWSVAQ 308

  Fly   383 SSLLLGEAEHSFGYCETGRKATQSEFTDYGKPYQLDDVIGCYLDLESEPCTINYTLNGEDLGVAF 447
            ||..|||.:.|:.|...|.|.|.|.|..||..:..:|||||:.|||.:...:.::.|||:||.||
 Frog   309 SSSQLGEDDLSYAYDSRGLKVTSSHFDPYGDTFGENDVIGCFADLEGDSVDLFFSKNGENLGEAF 373

  Fly   448 EFEKSILGEEGALFPHIVTKGYEYLVNFSDTEQLLVNAERPTRKRRKPRKDEDKDKDDDKDDNDG 512
            ..||.:..:  .||||::.||..:.|||.                   :||              
 Frog   374 HLEKEVADQ--PLFPHVLCKGCVFQVNFG-------------------QKD-------------- 403

  Fly   513 EKWKVLDEATADDDEVEKKDEDGKASSEKDEEEAEDPEKAKEDEAAPKTETEAETKVEAPAEAAK 577
            |.|                                                              
 Frog   404 EAW-------------------------------------------------------------- 406

  Fly   578 PESEATEASETAETSTEKSSETAAVSNGDAAAEQANDEKASEDKKPSENNDEEDEDGPSPNKRPK 642
                                                                          .|.
 Frog   407 --------------------------------------------------------------HPP 409

  Fly   643 TDG-----DSEKAESEKEKDRSQTTEDEYEDVVPEPRDTAALLEGYVLIGLVPVEKLVSGPQRVG 702
            .||     |:                        :|.|.|..||               .|:   
 Frog   410 PDGFIFLKDA------------------------QPEDLARSLE---------------SPE--- 432

  Fly   703 SRKECEVILLVGLPGAGKTHWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVY 767
             .:|.||:|::||||:|||.||..|..||::|:|.|:..|..:.::...|...:.......|.:.
 Frog   433 -TEEYEVLLMIGLPGSGKTTWALNHSQENSEKKYLLLSTDILLPQLKTAGPDPQQEDSKAKDSLT 496

  Fly   768 EICLNSLAALEDIAMKRRRNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELKRRIAEKE 832
            ::....|..|..:|.:|:||:|:||..||.|||||||..|..|:|.|||.:|||:|.|:|:.:::
 Frog   497 QLATQCLIRLIPLAARRKRNYIIDQCTVYNSAQRRKMNCFKGFQRKAVVVVPSEEEWKKRVEQRK 561

  Fly   833 EKGNAFTVKESTINNLRANFTLPSLEFGWFDDINYTELTGDEAKSEVKKYNEKGKKAIDA----- 892
            ||.... :.|:.:..::|||.:|. :..:..:|.|.||..|||::.:....::.::.:.|     
 Frog   562 EKEGEI-IPETVLLEMKANFNIPK-KTDYLHEILYPELDCDEAEALIIAAKKEARQLLPAPEKRG 624

  Fly   893 ----ERSRDKRSRG---SRDNY-RRDDRNRNRYNDDRRRDYGGQRHESRWSDSRRGGGGGGYSSN 949
                :|:|..|.||   ...|| :||..||...|..|::.|..|:..|.|:..|     |||   
 Frog   625 NRMHKRNRSDRGRGGYHGTGNYQQRDYGNRMFMNHPRQQMYHQQQQRSYWAPQR-----GGY--- 681

  Fly   950 SGGGGSRGYDNRRNYNSGSGGQQNWVQNSRRSGYDDRGYGGGGSGSRGYDNRNRG 1004
                        :||......|||            |.||    ..:.|..:|||
 Frog   682 ------------QNYYDQYPAQQN------------RYYG----QYQNYRQQNRG 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30122NP_001163196.1 SAP 6..40 CDD:280251 18/31 (58%)
SPRY_hnRNP 300..480 CDD:293942 70/185 (38%)
PHA02664 <529..659 CDD:177447 4/134 (3%)
AAA_33 709..855 CDD:290396 56/145 (39%)
NK 709..>836 CDD:302627 52/126 (41%)
DUF1777 1033..>1104 CDD:285811
hnrnpul2XP_012816728.1 PLN03124 8..>167 CDD:215591 59/225 (26%)
SAP 9..40 CDD:396567 18/30 (60%)
SPRY_hnRNP 232..404 CDD:293942 72/218 (33%)
AAA_33 438..583 CDD:404546 56/145 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5182
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001523
OrthoInspector 1 1.000 - - otm48363
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X963
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.000

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