DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30122 and Hnrnpul2

DIOPT Version :9

Sequence 1:NP_001163196.1 Gene:CG30122 / 37146 FlyBaseID:FBgn0050122 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001074665.1 Gene:Hnrnpul2 / 68693 MGIID:1915943 Length:745 Species:Mus musculus


Alignment Length:1050 Identity:275/1050 - (26%)
Similarity:399/1050 - (38%) Gaps:388/1050 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLEKMKVVDLRNELQSRGLDTKGVKAVLVERLRAYVE----------GGAGDGENAPVTPSRRQR 59
            :::::||.:||:|||.||||::|:|..|.:||:..::          ||||.|......|     
Mouse     2 EVKRLKVTELRSELQRRGLDSRGLKMDLAQRLQEALDAEMLEDEAGVGGAGPGGACKAEP----- 61

  Fly    60 RTRSMSRSPSPVQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEPEPEQSEPEEAEPAA 124
                          .||||.......:|||:.:|      |.|.|:...|.|.|:..|.      
Mouse    62 --------------RPVAASGGGPGGDEEEEDDD------EEEDEEALLEDEDEEPPPA------ 100

  Fly   125 AVTEDTTVNQAVNEESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPME---------- 179
                     ||:.:.:||.|    |..||.           |:..::|.:|.|.|          
Mouse   101 ---------QALGQAAQPPP----EPPETS-----------AMEAESEASDTPAEATAGSGGVNG 141

  Fly   180 -EDHD------AAPEEQEPTQTEEPVEEKPAESTVAEHQSNGDSQKMDVDEEDSAAPKTAEETEP 237
             |:||      ..|||:...:|  |..|.|.:..|.|...:.||:|                   
Mouse   142 GEEHDNGKGEEDGPEERSGDET--PGSEAPGDKAVEEQGDDQDSEK------------------- 185

  Fly   238 AAKPEDQPPERR--------KRSHSRSKSRSRSGSRSSKHRGSVGDKRESKAAAEERTVPEDEPT 294
             :||.....|||        |..|.|:....|..:..|:.:.....:.|:|...|::|:      
Mouse   186 -SKPAGSDGERRGVKRQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEAKDEEEDQTL------ 243

  Fly   295 IEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVRLSE---- 355
                 |.|....||||.:|....: ..:||.||.:..:|||||:.|||.:||||||.::::    
Mouse   244 -----VNLDTYTSDLHFQISKDRY-GGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPM 302

  Fly   356 -ESVPENSHYFRDEPHVRGFRVGFSMPKSSLLLGEAEHSFGYCETGRKATQSEFTDYGKPYQLDD 419
             |...|          |...|||:|:..|...|||.|.|:|:...|.||...:|.::|:.:..:|
Mouse   303 KEGCTE----------VSLLRVGWSVDFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGEND 357

  Fly   420 VIGCYLDLESEPCTINYTLNGEDLGVAFEFEKSILGEEGALFPHIVTKGYEYLVNFSDTEQLLVN 484
            ||||:.:.|:|...::::.|||||||||...|..|.:. ||.||::.|.....:||...|     
Mouse   358 VIGCFANFETEEVELSFSKNGEDLGVAFRISKESLADR-ALLPHVLCKNCVVELNFGQKE----- 416

  Fly   485 AERPTRKRRKPRKDEDKDKDDDKDDNDGEKWKVLDEATADDDEVEKKDEDGKASSEKDEEEAEDP 549
                                                                             
Mouse   417 ----------------------------------------------------------------- 416

  Fly   550 EKAKEDEAAPKTETEAETKVEAPAEAAKPESEATEASETAETSTEKSSETAAVSNGDAAAEQAND 614
                                                                             
Mouse   417 ----------------------------------------------------------------- 416

  Fly   615 EKASEDKKPSENNDEEDEDGPSPNKRPKTDGDSEKAESEKEKDRSQTTEDEYEDVVPEPRDTAAL 679
                                                                |...|.|      
Mouse   417 ----------------------------------------------------EPFFPPP------ 423

  Fly   680 LEGYVLIGLVPVEKLVSGPQRVGSRKECEVILLVGLPGAGKTHWAHKHVAENADKRYELIGPDAF 744
             |.:|.|..||||:.|.......:.:||||||:|||||:|||.||.|:..:|.::||.::|.:..
Mouse   424 -EEFVFIHAVPVEERVRTAVPPKTIEECEVILMVGLPGSGKTQWALKYAKDNPERRYNVLGAETV 487

  Fly   745 ISKMTIDGASRKTVHKGRWDKVYEICLNSLAALEDIAMKRRRNFILDQTNVYASAQRRKMKGFND 809
            :::|.:.|.....:.....|.:.:.....|:.|..||.:.:|||||||.|||.|.||||:..|..
Mouse   488 LTQMRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKT 552

  Fly   810 FKRIAVVCIPSEDELKRRI-AEKEEKGNAFTVKESTINNLRANFTLPSLEFGWFDDINYTELTGD 873
            |.|..||.:|:|::.|||: ..||.:|:  .|.||.:..::|||:||. :..:.|::.|.||..:
Mouse   553 FSRKVVVVVPNEEDWKRRLELRKEVEGD--DVPESIMLEMKANFSLPE-KCDYMDEVTYGELEKE 614

  Fly   874 EAKSEVKKYNEKGKKAIDAERSRDKRSRGSRDNYRRDDRN-RNRYNDDRRRDY-GGQRHESRWSD 936
            ||:..|.||.|:.:|.:.....|..         ||::|| |||.|..|.:.| ||||       
Mouse   615 EAQPIVTKYKEEARKLLPPSEKRTN---------RRNNRNKRNRQNRSRGQGYVGGQR------- 663

  Fly   937 SRRGGGGGGYSSNSGGGGSRGYDNRRNYNSGSGGQQNWVQNSRRSGYD---DRGYGGGGSG--SR 996
                               ||||||      :.|||.|.|:..|.||.   || |.|....  ||
Mouse   664 -------------------RGYDNR------AYGQQYWGQSGNRGGYRNFYDR-YRGDYERFYSR 702

  Fly   997 GYD-NRNRGY 1005
            .|: ||.|.|
Mouse   703 DYEYNRYRDY 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30122NP_001163196.1 SAP 6..40 CDD:280251 16/33 (48%)
SPRY_hnRNP 300..480 CDD:293942 69/184 (38%)
PHA02664 <529..659 CDD:177447 0/129 (0%)
AAA_33 709..855 CDD:290396 59/146 (40%)
NK 709..>836 CDD:302627 52/127 (41%)
DUF1777 1033..>1104 CDD:285811
Hnrnpul2NP_001074665.1 SAP 3..37 CDD:128789 16/33 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..239 61/271 (23%)
SPRY_hnRNP 244..415 CDD:293942 69/182 (38%)
NK 452..>634 CDD:302627 72/184 (39%)
AAA_33 452..597 CDD:290396 59/146 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..664 17/73 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5115
eggNOG 1 0.900 - - E1_KOG2242
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 367 1.000 Inparanoid score I2136
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001523
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12381
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X963
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
88.010

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