DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30122 and hnrnpul1

DIOPT Version :9

Sequence 1:NP_001163196.1 Gene:CG30122 / 37146 FlyBaseID:FBgn0050122 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_998436.1 Gene:hnrnpul1 / 406555 ZFINID:ZDB-GENE-040426-2432 Length:784 Species:Danio rerio


Alignment Length:1270 Identity:329/1270 - (25%)
Similarity:464/1270 - (36%) Gaps:501/1270 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LEKMKVVDLRNELQSRGLDTKGVKAVLVERLRAYVEGGAGDGENAPVTPSRRQRRTRSMSRSPSP 70
            ::|:||.:|:.|||.||||::|:||.|||||                                  
Zfish     5 VKKLKVNELKEELQKRGLDSRGLKADLVERL---------------------------------- 35

  Fly    71 VQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEP-EPEQSEPEEAEPAAAVTEDTTVNQ 134
                       |..||:|:|      |..:.|.|...||. ..|||:.|:              .
Zfish    36 -----------LAALEDEKQ------PTCDEEVETGVAEAGNDEQSDQEQ--------------M 69

  Fly   135 AVNEESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPMEEDHDAAP---EEQEPTQTEE 196
            |..:||.....:|.|....:.|.::::|. ||.|      :...:|:|:.||   :.::..:|||
Zfish    70 AGEKESSEMGTDFPEVPNDESKIKSVDEQ-PATV------ETVSKEEHEVAPVKLKSEDDIKTEE 127

  Fly   197 PVEEKPAESTVAEHQSNGDSQKMDVDEEDSAAPKTAEE--TEPAAKPEDQPPERRKRSHSRSKSR 259
            . |::|..|:                |.::...:..||  |||           .:.||...|.|
Zfish   128 Q-EQRPEASS----------------EREALESQQTEECKTEP-----------DRHSHHGHKRR 164

  Fly   260 SRSGSRSSKHRGSVGDKRESK-AAAEERTVPEDEPTIEENKVGLSWLDSDLHLRIDPTTFASAKP 323
                 ....|..|..|.||.| :.:.:.:..||:...::..|.:...:||||.::.| ...|..|
Zfish   165 -----YDEAHGNSHYDHREDKRSRSPQPSAEEDDEDFDDTLVAIDTYNSDLHFKVSP-DHCSGYP 223

  Fly   324 LTSEIYSLIWSGARANYGVREGKVCFEVRLSEESVPENSHYFRDEPHVRGFRVGFSMPKSSLLLG 388
            ||.|.::.:||||||.|||.:|:||:|:::.|....::......:|||  .|||:|:...|..||
Zfish   224 LTIEGFAYLWSGARATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHV--VRVGWSLDSCSTQLG 286

  Fly   389 EAEHSFGYCETGRKATQSEFTDYGKPYQLDDVIGCYLDLES-EPCTINYTLNGEDLGVAFEFEKS 452
            |...|:||..||:|:|..:|.|||:.:...|:||||:|.:| |...:.::.||:.|.|||...|.
Zfish   287 EEAFSYGYGGTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVEMAFSKNGKWLDVAFRVSKE 351

  Fly   453 ILGEEGALFPHIVTKGYEYLVNFSDTEQLLVNAERPTRKRRKPRKDEDKDKDDDKDDNDGEKWKV 517
            .|..: |||||::.|......||...|                                      
Zfish   352 ELAGQ-ALFPHVLVKNCAVEFNFGQRE-------------------------------------- 377

  Fly   518 LDEATADDDEVEKKDEDGKASSEKDEEEAEDPEKAKEDEAAPKTETEAETKVEAPAEAAKPESEA 582
                                                                             
Zfish   378 ----------------------------------------------------------------- 377

  Fly   583 TEASETAETSTEKSSETAAVSNGDAAAEQANDEKASEDKKPSENNDEEDEDGPSPNKRPKTDGDS 647
                                                                             
Zfish   378 ----------------------------------------------------------------- 377

  Fly   648 EKAESEKEKDRSQTTEDEYEDVVPEPRDTAALLEGYVLIGLVPVEKLVSGPQRVGSRKECEVILL 712
                               |...|.|       :||..||.|.:|..|.|.....|:.:|:|:::
Zfish   378 -------------------EPYFPLP-------DGYSFIGDVSLENRVRGTVGPSSKSDCQVLMM 416

  Fly   713 VGLPGAGKTHWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLAAL 777
            ||||..|||.||.||...|.|||:.::|.:|.:.||.:.|..|:..:.||||.:.:.....|..|
Zfish   417 VGLPACGKTTWAAKHAEMNPDKRFNILGTNAIMEKMKVMGLRRQRNYAGRWDILIQQATQCLNRL 481

  Fly   778 EDIAMKRRRNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELKRRIAEKEEKGNAFTVKE 842
            ..||..::||:||||||||.|||||||:.|..|.|.|||..|.:::||.|..::.|.|.  .|.:
Zfish   482 LQIASHKKRNYILDQTNVYGSAQRRKMRPFEGFHRKAVVICPRDEDLKERRCKQAEDGK--DVPD 544

  Fly   843 STINNLRANFTLPSLEFGWF-DDINYTELTGDEAKSEVKKYNEKGKKAIDAERSRDKRSRGSRDN 906
            ..:..::|||.||  |.|.| |::.:.||..|||:..:|:|||:|:||......| ..|.|.|  
Zfish   545 QAVLEMKANFVLP--EAGDFLDEVMFIELQRDEARDLIKRYNEEGRKAGPPPEKR-FNSWGDR-- 604

  Fly   907 YRRDDRNRNRYNDDRRRDYGGQR--HESRWSDSRRGGGGGGYSSNSGGGGSRGYDNRRNYNSGSG 969
             ||::.|..||:     .:||.|  |:|      |||.|||||    |||         ||    
Zfish   605 -RRENNNNQRYD-----SHGGSRGGHQS------RGGSGGGYS----GGG---------YN---- 640

  Fly   970 GQQNWVQNSRRSGYDDRGYGGGGSGSRGYDNRNRGYAGGSGGGGGGGGGGGGGGGQQNWMQNNRR 1034
                      |.||....:||      .|.:...||:..|....||.            ..|:|.
Zfish   641 ----------RDGYSQNRWGG------NYRDSRDGYSSSSSHQTGGN------------YNNSRY 677

  Fly  1035 SGYDDRGYGSSRDYRDRDRGNDRSRMGSNDRNRGSSQSSYRSGGGTHQQRDFRPGHRDTKEDSRG 1099
            ..|:..|||                .|.|......:||||  |.|.:.|                
Zfish   678 GSYNKEGYG----------------QGYNQGYNQGNQSSY--GQGNYNQ---------------- 708

  Fly  1100 GYERSAGQSLPKYGNNTAVGGGYDQYKQQGGAPGGGKASLSGKWSTYSQHHQQQQAPQHQQTGIW 1164
            ||         .|||       |:||      ||            |.|.:|..|       |..
Zfish   709 GY---------NYGN-------YNQY------PG------------YGQGYQDNQ-------GSG 732

  Fly  1165 QTQQQSQQYQQPQQAAAGQQQYWAYNQMQTGYGNQQAWQSADPQQQQQWMSWWQQQQQGSGGAAA 1229
            |:..|....||.||.|...|:|:                    |.|.||..::.|.         
Zfish   733 QSYNQQNYNQQYQQYAQQWQEYY--------------------QNQSQWNQYYGQY--------- 768

  Fly  1230 GNASGGSGVNVGGGAGNNDGGAANHYWSQYSYSTQ 1264
            ||.||..|                   ||.||.:|
Zfish   769 GNYSGQQG-------------------SQSSYGSQ 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30122NP_001163196.1 SAP 6..40 CDD:280251 19/33 (58%)
SPRY_hnRNP 300..480 CDD:293942 71/180 (39%)
PHA02664 <529..659 CDD:177447 0/129 (0%)
AAA_33 709..855 CDD:290396 63/145 (43%)
NK 709..>836 CDD:302627 58/126 (46%)
DUF1777 1033..>1104 CDD:285811 16/70 (23%)
hnrnpul1NP_998436.1 SAP 5..39 CDD:128789 20/78 (26%)
SPRY_hnRNP 201..378 CDD:293942 72/367 (20%)
AAA_33 413..557 CDD:290396 63/145 (43%)
NK 413..>509 CDD:302627 46/95 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5203
eggNOG 1 0.900 - - E1_KOG2242
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 404 1.000 Inparanoid score I1871
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001523
OrthoInspector 1 1.000 - - otm25316
orthoMCL 1 0.900 - - OOG6_106467
Panther 1 1.100 - - O PTHR12381
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3099
SonicParanoid 1 1.000 - - X963
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.850

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