Protein Alignment CG30122 and hnrnpub

DIOPT Version :10

• Sequence 1: NP_001163196.1
• Gene: CG30122 / 37146
• FlyBaseID: FBgn0050122
• Length: 1272
• Species: Drosophila melanogaster
• Sequence 2: NP_001028767.3
• Gene: hnrnpub / 334490
• ZFINID: ZDB-GENE-030131-6422
• Length: 794
• Species: Danio rerio
• Alignment Length: 1183
• Identity: 288/1183 - (24%)
• Similarity: 451/1183 - (38%)
• Gaps: 404/1183 - (34%)

  Fly     1 MDVAKLEKMKVVDLRNELQSRGLDTKGVKAVLVERLRAYVEGGAGDGENAPVTPSRRQRRTRSMS 65
            |....::|:||.:|::||:.|.|..||:||.|:|||:|.::..|...|.....|.     |...|
Zfish     1 MSEINVKKLKVNELKDELKKRQLSDKGLKAELMERLQAALDAEAQAQEEETTAPG-----TTEGS 60

  Fly    66 RSPSPVQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEPEPEQSEPEEAEPAAAVTEDT 130
            :..:......|||       |:|...|:      |||.|
Zfish    61 KVGNDADGNGVAA-------EQEGTGEE------EPEGE-------------------------- 86

  Fly   131 TVNQAVNEESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPMEEDHDAAPEEQEPTQTE 195
                  |.|::.:..|.||.:..||                |:.:|..||:.|.|.||.:....:
Zfish    87 ------NMEAEEQNGEGDEAAGQDD----------------EMGEEEEEEEDDDAGEEIDKALDD 129

  Fly   196 EPVEEKPAESTVAEHQSNGDSQKMDVDEEDSAAPKTAEETEPAAKPEDQPPERRKRSHSRSKSRS 260
            |..||            :....|:||::.|      |::...|.:...:..:||:..|.|.
Zfish   130 EDDEE------------DDIIDKIDVEDGD------ADKDSSADQKNKKGVKRRREDHGRG---- 172

  Fly   261 RSGSRSSKHRGSVGDKRESKAAAEERTVPEDEPTIEENKVGLSWLDSDLHLRIDPTTFASAKPLT 325
                    :...:.:.:.|:..:.:..:.|.:...::..|.|...:.|||.::....: ||..||
Zfish   173 --------YFEFIEESKYSRTKSPQPPLEEVDEEFDDTLVCLDPYNCDLHFKVSRNRY-SASSLT 228

  Fly   326 SEIYSLIWSGARANYGVREGKVCFEVRLSEESVPE--NSHY--FRDEPHVRGFRVGFSMPKSSLL 386
            .|.::.:|:|.||:|||.:||||||::::|::..:  ||..  |.|      ..:|:|:....|.
Zfish   229 MESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIKHLNSKIMDFHD------VHIGWSLANGCLS 287

  Fly   387 LGEAEHSFGYCETGRKATQSEFTDYGKPYQLDDVIGCYLDLESEPCTINYTLNGEDLGVAFEFEK 451
            |||.|.|:.|.:.|:||:.....|||:.:..:|||||:::.|::...|:::.||.||||||:..|
Zfish   288 LGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVIGCFINFEADEVEISFSKNGNDLGVAFKVNK 352

  Fly   452 SILGEEGALFPHIVTKGYEYLVNFSDTEQLLVNAERPTRKRRKPRKDEDKDKDDDKDDNDGEKWK 516
            ..|.:. |||||::........||...|....
Zfish   353 ESLADR-ALFPHVLCHNCTVEFNFGQNETPFF--------------------------------- 383

  Fly   517 VLDEATADDDEVEKKDEDGKASSEKDEEEAEDPEKAKEDEAAPKTETEAETKVEAPAEAAKPESE 581
                                                                             
Zfish   384 ----------------------------------------------------------------- 383

  Fly   582 ATEASETAETSTEKSSETAAVSNGDAAAEQANDEKASEDKKPSENNDEEDEDGPSPNKRPKTDGD 646
                                                                       ||
Zfish   384 -----------------------------------------------------------PK---- 385

  Fly   647 SEKAESEKEKDRSQTTEDEYEDVVPEPRDTAALLEGYVLIGLVPVEKLVSGPQRVGSRKECEVIL 711
                                             ||.:..:..:|:|:.:.||:...::|:||||:
Zfish   386 ---------------------------------LEDFTFMQQIPLEERIRGPKGPVTKKDCEVIV 417

  Fly   712 LVGLPGAGKTHWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLAA 776
            :|||||:|||.|..|||.||..| |.::..:..:.|:.|:...|:.....:...:.:.....|..
Zfish   418 MVGLPGSGKTTWVVKHVEENPGK-YNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGK 481

  Fly   777 LEDIAMKRRRNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELKRRIAEKEEKGNAFTVK 841
            |.:||.:::|::|||||||.::||||||..|..|:|.|||..|:::.||.| |:|:.:.:...:.
Zfish   482 LIEIAARKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKER-AQKKAEADGKDIP 545

  Fly   842 ESTINNLRANFTLPSLEFGWFDDINYTELTGDEAKSEVKKYNEKGKKAIDAERSRDKRSRGSRDN 906
            |..:..::|.:|||. :...|.::.|.||..|||...::||.|:.|.|:..|:..::.....:..
Zfish   546 EHALLKMKALYTLPE-QGDCFSEVTYVELQKDEASKLLEKYKEESKNALPPEKKPNQGPPTPKRG 609

  Fly   907 YRRDDRNRNRYNDDRRRDYGGQRHESRWSDSRRGGGGGGYSSNSGGGGSRGYDNRRNYNSGSGGQ 971
            .||....:|::|                   |.||||||...|.||.|  |:..|.||.:
Zfish   610 SRRGRGQKNQFN-------------------RSGGGGGGGQGNRGGRG--GFQPRGNYRA----- 648

  Fly   972 QNWVQNSRRSGYD--DRGY----GGGGSGSRGYDNRNRGYAGGSGGGGGGGGGGGGGGGQQNWMQ 1030
              .:...|.||:|  .|||    .......|||.:|: ||..| |.||....|....|||   |:
Zfish   649 --LLAPPRVSGFDRRPRGYILPPPPPPPVYRGYPSRD-GYNRG-GSGGMQSRGMSPRGGQ---MR 706

  Fly  1031 NNRRSGYDDRGYGSSRDYRDRDRGNDRSRMGSNDRNRGSSQSSYRSGGGTHQQRDFRPGHRDTKE 1095
            .|..|    ||.|.|       ||...:|.|  :.:||..|     ||..|:      ||...|.
Zfish   707 GNMAS----RGGGMS-------RGGHANRGG--NMHRGGGQ-----GGPNHR------GHYQQKF 747

  Fly  1096 DSRGGYERSAGQSLPKYGNNTAVGGGYDQYKQQGGAPGGGKASLSGKWSTYSQHHQQQQAPQHQQ 1160
            ..|||::::.|    .|||.   .|.:.|                    .::|..||
Zfish   748 HGRGGHQQNRG----GYGNK---NGSFAQ--------------------AFNQSWQQ-------- 777

  Fly  1161 TGIWQTQQQSQQY 1173
             |.|..:..:|||
Zfish   778 -GFWNQKPWNQQY 789

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG30122	NP_001163196.1	SAP	6..40	CDD:460424	17/33 (52%)
		PLN03124	8..>168	CDD:215591	39/159 (25%)
		SPRY_hnRNP	300..480	CDD:293942	67/183 (37%)
		PTZ00121	<520..>677	CDD:173412	2/156 (1%)
		AAA_33	709..855	CDD:463952	54/145 (37%)
		SF-CC1	1036..>1108	CDD:273721	21/71 (30%)
hnrnpub	NP_001028767.3	None