DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30122 and HNRNPUL2

DIOPT Version :9

Sequence 1:NP_001163196.1 Gene:CG30122 / 37146 FlyBaseID:FBgn0050122 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001073027.1 Gene:HNRNPUL2 / 221092 HGNCID:25451 Length:747 Species:Homo sapiens


Alignment Length:1056 Identity:276/1056 - (26%)
Similarity:395/1056 - (37%) Gaps:398/1056 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLEKMKVVDLRNELQSRGLDTKGVKAVLVERLRAYVE----------GGAGDGENAPVTPSRRQR 59
            :::::||.:||:|||.||||::|:|..|.:||:..::          ||||.|            
Human     2 EVKRLKVTELRSELQRRGLDSRGLKVDLAQRLQEALDAEMLEDEAGGGGAGPG------------ 54

  Fly    60 RTRSMSRSPSPVQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEPEPEQSEPEEAEPAA 124
              .:....|.||.|:  ...|..|..|:||:         |.|.|:...|.|.|:..|.      
Human    55 --GACKAEPRPVAAS--GGGPGGDEEEDEEE---------EEEDEEALLEDEDEEPPPA------ 100

  Fly   125 AVTEDTTVNQAVNEESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPMEEDHDAAPEEQ 189
                     ||:.:.:||.||                   |......|.|.||     ||:    
Human   101 ---------QALGQAAQPPPE-------------------PPEAAAMEAAAEP-----DAS---- 128

  Fly   190 EPTQTEEPVEEKPAESTVAEHQSN-GDSQKMDVDEEDSAAPKTAEETEPAAKPEDQPPERRKRSH 253
                      |||||:|......| |:.|.:...|||....::.:||..:..|.|:..|.:....
Human   129 ----------EKPAEATAGSGGVNGGEEQGLGKREEDEPEERSGDETPGSEVPGDKAAEEQGDDQ 183

  Fly   254 SRSKSRSRSGSRSSKHRGSVGDKRESKAAAEER----------------------TVPEDEPTIE 296
            .         |..||..||.|::|..|...:|:                      ..||:|...|
Human   184 D---------SEKSKPAGSDGERRGVKRQRDEKDEHGRAYYEFREEAYHSRSKSPLPPEEEAKDE 239

  Fly   297 ENK---VGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVRLSE--- 355
            |..   |.|....||||.::....: ..:||.||.:..:|||||:.|||.:||||||.::::   
Human   240 EEDQTLVNLDTYTSDLHFQVSKDRY-GGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLP 303

  Fly   356 --ESVPENSHYFRDEPHVRGFRVGFSMPKSSLLLGEAEHSFGYCETGRKATQSEFTDYGKPYQLD 418
              |...|          |...|||:|:..|...|||.|.|:|:...|.||...:|.::|:.:..:
Human   304 MKEGCTE----------VSLLRVGWSVDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGEN 358

  Fly   419 DVIGCYLDLESEPCTINYTLNGEDLGVAFEFEKSILGEEGALFPHIVTKGYEYLVNFSDTEQLLV 483
            |||||:.:.|:|...::::.|||||||||...|..|.:. ||.||::.|.....:||...|    
Human   359 DVIGCFANFETEEVELSFSKNGEDLGVAFWISKDSLADR-ALLPHVLCKNCVVELNFGQKE---- 418

  Fly   484 NAERPTRKRRKPRKDEDKDKDDDKDDNDGEKWKVLDEATADDDEVEKKDEDGKASSEKDEEEAED 548
                                                                             
Human   419 ----------------------------------------------------------------- 418

  Fly   549 PEKAKEDEAAPKTETEAETKVEAPAEAAKPESEATEASETAETSTEKSSETAAVSNGDAAAEQAN 613
                                                                             
Human   419 ----------------------------------------------------------------- 418

  Fly   614 DEKASEDKKPSENNDEEDEDGPSPNKRPKTDGDSEKAESEKEKDRSQTTEDEYEDVVPEPRDTAA 678
                                                                 |...|.|     
Human   419 -----------------------------------------------------EPFFPPP----- 425

  Fly   679 LLEGYVLIGLVPVEKLVSGPQRVGSRKECEVILLVGLPGAGKTHWAHKHVAENADKRYELIGPDA 743
              |.:|.|..||||:.|.......:.:||||||:|||||:|||.||.|:..||.:|||.::|.:.
Human   426 --EEFVFIHAVPVEERVRTAVPPKTIEECEVILMVGLPGSGKTQWALKYAKENPEKRYNVLGAET 488

  Fly   744 FISKMTIDGASRKTVHKGRWDKVYEICLNSLAALEDIAMKRRRNFILDQTNVYASAQRRKMKGFN 808
            .:::|.:.|.....:.....|.:.:.....|:.|..||.:.:|||||||.|||.|.||||:..|.
Human   489 VLNQMRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFK 553

  Fly   809 DFKRIAVVCIPSEDELKRRI-AEKEEKGNAFTVKESTINNLRANFTLPSLEFGWFDDINYTELTG 872
            .|.|..||.:|:|::.|:|: ..||.:|:  .|.||.:..::|||:||. :..:.|::.|.||..
Human   554 TFSRKVVVVVPNEEDWKKRLELRKEVEGD--DVPESIMLEMKANFSLPE-KCDYMDEVTYGELEK 615

  Fly   873 DEAKSEVKKYNEKGKKAIDAERSRDKRSRGSRDNYRRDDRN-RNRYNDDRRRDY-GGQRHESRWS 935
            :||:..|.||.|:.:|.:.....|..         ||::|| |||.|..|.:.| ||||      
Human   616 EEAQPIVTKYKEEARKLLPPSEKRTN---------RRNNRNKRNRQNRSRGQGYVGGQR------ 665

  Fly   936 DSRRGGGGGGYSSNSGGGGSRGYDNRRNYNSGSGGQQNWVQNSRRSGYD----------DRGYGG 990
                                ||||||      :.|||.|.|...|.||.          ||.|| 
Human   666 --------------------RGYDNR------AYGQQYWGQPGNRGGYRNFYDRYRGDYDRFYG- 703

  Fly   991 GGSGSRGYD-NRNRGY 1005
                 |.|: ||.|.|
Human   704 -----RDYEYNRYRDY 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30122NP_001163196.1 SAP 6..40 CDD:280251 16/33 (48%)
SPRY_hnRNP 300..480 CDD:293942 68/184 (37%)
PHA02664 <529..659 CDD:177447 0/129 (0%)
AAA_33 709..855 CDD:290396 60/146 (41%)
NK 709..>836 CDD:302627 53/127 (42%)
DUF1777 1033..>1104 CDD:285811
HNRNPUL2NP_001073027.1 SAP 3..37 CDD:128789 16/33 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..242 65/288 (23%)
SPRY_hnRNP 246..417 CDD:293942 68/182 (37%)
NK 454..>636 CDD:302627 73/184 (40%)
AAA_33 454..599 CDD:290396 60/146 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 627..666 17/73 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 132 1.000 Domainoid score I5108
eggNOG 1 0.900 - - E1_KOG2242
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 378 1.000 Inparanoid score I2084
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001523
OrthoInspector 1 1.000 - - otm51488
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X963
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
109.920

Return to query results.
Submit another query.