DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cth and metB

DIOPT Version :10

Sequence 1:NP_611352.1 Gene:Cth / 37143 FlyBaseID:FBgn0000566 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_418374.1 Gene:metB / 948434 ECOCYCID:EG10582 Length:386 Species:Escherichia coli


Alignment Length:384 Identity:159/384 - (41%)
Similarity:228/384 - (59%) Gaps:6/384 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHRGYEYSRSGNPTRNVLETCFAALDNAKY 75
            ||.::.||.:.|: :...|:|||.||:|:......|.|.::|||.|||||:|::...|.|:....
E. coli     6 ATIAVRSGLNDDE-QYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAG 69

  Fly    76 GLTFSSGLGATTAVLTM-LSSGDHIIMGDDVYGGTNRLIRQVATRLGISATFVDPTKLDLIKSSI 139
            .:..::|:.|...|.|: |..||.::...|.|||:.||...:|.|......|||......:::::
E. coli    70 AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAAL 134

  Fly   140 KPETKLVWIESPTNPLVKVADIEAIAQLVHGVRE-DIVLAVDNTFLTSYFQRPLELGADLVCYSL 203
            ..:.|||.:|||:|||::|.|   ||::.|..|| ..|..||||||:...|.||.||||||.:|.
E. coli   135 AEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSC 196

  Fly   204 TKYMNGHTDVVMGGITMNSEKLYKSLKFLQNAVGIVPSPFDCYQVNRSLKTLSLRMEQHQKNALK 268
            |||:|||:|||.|.:......:...|.:..|.:|:....||.|.:.|.|:||..|||..|:||..
E. coli   197 TKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQA 261

  Fly   269 VAKYLETNPFVEKVLHPSLPSHPQHKIALKQAYGYSGVFSFYIKGELKHSSAFLKALKVFTLAES 333
            :.|||:|.|.|:|:.|||||.:..|:||.:|..|:..:.||.:.|:.:....||..|.:||||||
E. coli   262 IVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAES 326

  Fly   334 LGGYESLAELPSIMTHASVPAEDRKTLGITDGLVRLSVGLEDADDLIKDLEQALEIASK 392
            |||.|||....:.||||.:..|.|...||::.|:|:|.|:||.:|||.|||.....|:|
E. coli   327 LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CthNP_611352.1 MetC 9..388 CDD:440391 157/378 (42%)
metBNP_418374.1 PRK08045 1..386 CDD:169194 159/384 (41%)

Return to query results.
Submit another query.