DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cth and met17

DIOPT Version :10

Sequence 1:NP_611352.1 Gene:Cth / 37143 FlyBaseID:FBgn0000566 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_595189.1 Gene:met17 / 2540849 PomBaseID:SPBC428.11 Length:429 Species:Schizosaccharomyces pombe


Alignment Length:433 Identity:151/433 - (34%)
Similarity:220/433 - (50%) Gaps:53/433 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQPSGFATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHR-------GYEYSRSGNPTRNV 62
            |:...|.|..:|:||.||...|:..:|..:.::...:|.....|       ||.|||..|||.:|
pombe     3 VESEHFETLQLHAGQEPDAATSSRAVPIYATTSYVFRDCDHGGRLFGLQEPGYIYSRMMNPTADV 67

  Fly    63 LETCFAALDNAKYGLTFSSGLGATTAVLTMLS-SGDHIIMGDDVYGGTNRLIRQVATRLGISATF 126
            .|...|||::....:..|||..|....||.|: :||:|:....:||||..|.:....||||:..|
pombe    68 FEKRIAALEHGAAAIATSSGTSALFMALTTLAKAGDNIVSTSYLYGGTYNLFKVTLPRLGITTKF 132

  Fly   127 V---DPTKLDLIKSSIKPETKLVWIESPTNPLVKVADIEAIAQLVHGVREDIVLAVDNTF-LTSY 187
            |   ||..|   .:.|...||.|::||..||:..|.|.|.||::.|..  .:.|.||||| ...|
pombe   133 VNGDDPNDL---AAQIDENTKAVYVESIGNPMYNVPDFERIAEVAHAA--GVPLMVDNTFGGGGY 192

  Fly   188 FQRPLELGADLVCYSLTKYMNGHTDVVMGGITMNSEKL------------------YKSLKFLQ- 233
            ..||::.|||:|.:|.||::.|| ...:||:.::|.|.                  |..:.|.: 
pombe   193 LVRPIDHGADIVTHSATKWIGGH-GTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTET 256

  Fly   234 ---------------NAVGIVPSPFDCYQVNRSLKTLSLRMEQHQKNALKVAKYLETNPFVEKVL 283
                           ..||...:||..:.:.:.|:|||||||:|.:||..:|||||.:|.|..|.
pombe   257 FGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVS 321

  Fly   284 HPSLPSHPQHKIALKQ-AYGYSGVFSFYIKGELKHSSAFLKALKVFTLAESLGGYESLAELPSIM 347
            :|.|.||..||:|.|. ..||..|.||..||....|...:.|||:.:...::|..::|...|:..
pombe   322 YPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKLASQLANVGDAKTLVIAPAYT 386

  Fly   348 THASVPAEDRKTLGITDGLVRLSVGLEDADDLIKDLEQALEIA 390
            ||..:..|::.:.|:|..|:|::||:|..||:|.|..||||:|
pombe   387 THLQLTDEEQISAGVTKDLIRVAVGIEHIDDIIADFAQALEVA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CthNP_611352.1 MetC 9..388 CDD:440391 147/425 (35%)
met17NP_595189.1 MET17 1..429 CDD:442120 150/431 (35%)

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