DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cth and Cth

DIOPT Version :10

Sequence 1:NP_611352.1 Gene:Cth / 37143 FlyBaseID:FBgn0000566 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_058770.2 Gene:Cth / 24962 RGDID:2443 Length:398 Species:Rattus norvegicus


Alignment Length:381 Identity:236/381 - (61%)
Similarity:305/381 - (80%) Gaps:1/381 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHRGYEYSRSGNPTRNVLETCFAALDNAK 74
            |||::||.||.|:||.|.||:.||||:||||||:||:..|:.||||||||||.||...||||.||
  Rat    17 FATQAIHVGQEPEQWSSRAVVLPISLATTFKQDSPGQSSGFVYSRSGNPTRNCLEKAVAALDGAK 81

  Fly    75 YGLTFSSGLGATTAVLTMLSSGDHIIMGDDVYGGTNRLIRQVATRLGISATFVDPTKLDLIKSSI 139
            :.|||:|||.|||.:..:|.:||.:|..|:|||||||..|:||:..|:..:|||.:|..|::::|
  Rat    82 HCLTFASGLAATTTITHLLKAGDEVICMDEVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAI 146

  Fly   140 KPETKLVWIESPTNPLVKVADIEAIAQLVHGVREDIVLAVDNTFLTSYFQRPLELGADLVCYSLT 204
            .|:|||||||:||||.:|:|||:|.||:|| ..:||:|.|||||:::||||||.||||:...|.|
  Rat   147 TPQTKLVWIETPTNPTLKLADIKACAQIVH-KHKDIILVVDNTFMSAYFQRPLALGADICMCSAT 210

  Fly   205 KYMNGHTDVVMGGITMNSEKLYKSLKFLQNAVGIVPSPFDCYQVNRSLKTLSLRMEQHQKNALKV 269
            ||||||:|||||.:::||:.|.:.|:||||::|.||||||||...|.||||.:|||:|.:|.:.|
  Rat   211 KYMNGHSDVVMGLVSVNSDDLNERLRFLQNSLGAVPSPFDCYLCCRGLKTLQIRMEKHFRNGMAV 275

  Fly   270 AKYLETNPFVEKVLHPSLPSHPQHKIALKQAYGYSGVFSFYIKGELKHSSAFLKALKVFTLAESL 334
            |::||:||.||||::|.|||||||::|.:|..|..|:.||||||.|:|:..|||.:|:|.|||||
  Rat   276 ARFLESNPRVEKVIYPGLPSHPQHELAKRQCTGCPGMVSFYIKGTLQHAQVFLKNIKLFALAESL 340

  Fly   335 GGYESLAELPSIMTHASVPAEDRKTLGITDGLVRLSVGLEDADDLIKDLEQALEIA 390
            ||||||||||:||||||||.:||.||||:|.|:||||||||..||::||.|||:.|
  Rat   341 GGYESLAELPAIMTHASVPEKDRATLGISDTLIRLSVGLEDEKDLLEDLGQALKAA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CthNP_611352.1 MetC 9..388 CDD:440391 234/377 (62%)
CthNP_058770.2 Cys_Met_Meta_PP 18..394 CDD:395837 232/375 (62%)

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