DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and Exoc3l2

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001357729.1 Gene:Exoc3l2 / 74463 MGIID:1921713 Length:789 Species:Mus musculus


Alignment Length:667 Identity:140/667 - (20%)
Similarity:272/667 - (40%) Gaps:78/667 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNA 143
            ||....|||   ||    |.|...|...|..:.....|.|        ||.:.:.||:..:|..|
Mouse   140 RRASLAERL---VP----AGEAAPEPPPKVPEPPKIKEPL--------SVLEILGLIQRRELARA 189

  Fly   144 HQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKP 208
            .:.:.:||          .:.|...|  :....|....|..:.:.|:::|..::..:|    ..|
Mouse   190 DEHILELE----------AEAPTAEA--EAGAGRRARDVALLYEALQRELWALVRESL----ASP 238

  Fly   209 ---TIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEER 270
               |..|:.|.::         .||::.......||..:..|....:     .:.|....:|||.
Mouse   239 GPGTGAVSQLGLV---------LLQEEAADARRGPGAARKLRTHWAE-----AVARAARERLEEA 289

  Fly   271 A--DNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGL 333
            |  ..:..|...||.||..:|||:..|:....|.:|........|::.|||.|:.:|....|..|
Mouse   290 AAPGARGALAGQLEALRARLLEDVAAVRGRLAPAYPAGLRAGAVYLRGYHEALAEWLGAAARRRL 354

  Fly   334 EGNEYVSMMAWVTHTYPGVELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTK 398
            ...:..:::.|..|.||. |::...||....:.::|.||....|:.||||.:.:::...:..:.:
Mouse   355 PLADRYALLHWHNHVYPR-EILGLVDLVALENGELGPLLSAGTLRGLEDECVTDVKAQTRAALLR 418

  Fly   399 AAETEKQEWFTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQ 463
            ..:.::::|       ...:|..::....:.:::::|.:....|.||...:.....:..:..|.|
Mouse   419 VLQEDEEQW-------GSMDYRPSNLAQDVCELLEEHTERAPHISQEFVERMAYCCLGGLAEFLQ 476

  Fly   464 TYLKNVIELKEH-HFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLL 527
            ::.:.|....|: ..|......|.:. .|::||....:..||:::.::..|:|....    |...
Mouse   477 SFQQRVERFHENPGIRELPSDTYISR-TISMVNCGPPLRSLAERLARVGPPESEPAR----EASA 536

  Fly   528 ATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEM 592
            ....|:.......|.|..|.:::.|||.|...|||:|:.|:|.|..||.........::...:::
Mouse   537 IALDRVTRLCHRVLAELLFQELQPHFNKLMRRKWLSSSEALDGIVGTLGAQALALRRMQDEPYQV 601

  Fly   593 VINEAQKLLAKRYIRALLSKRL----SKPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPL 653
            ::.|..:.....|:|.||..||    ::.|:.   :..:::.:|.:.:..|.::..:....|   
Mouse   602 LVAELHRRALVEYVRPLLRGRLRCRSARTRSR---VAGRLREDAAQLQRLFRRLESQAYWLD--- 660

  Fly   654 DLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYI---RNDVKAAEVREKVQDAMKS 714
            .::..|:.:|. .|...:.:::..|:..||.:...|:..|..|   ||.....|:....:|...|
Mouse   661 QVVPHLAEILQLEDTPSIQVEVGVLVRDYPDIRRKHVAALLDIRGLRNTAARQEILAVARDLELS 725

  Fly   715 KKAMVSIAKQDCIFKEI 731
            :...:..::....|.:|
Mouse   726 ESGALPPSRDRAFFADI 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 115/565 (20%)
Exoc3l2NP_001357729.1 Sec6 215..742 CDD:388691 115/563 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848885
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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