DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec6 and Exoc3l2

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_038956763.1 Gene:Exoc3l2 / 686809 RGDID:1592539 Length:788 Species:Rattus norvegicus


Alignment Length:669 Identity:141/669 - (21%)
Similarity:270/669 - (40%) Gaps:83/669 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNA 143
            ||....|||   ||    |.|...|...|..:.....|.|        ||.:.:.||:..:|..|
  Rat   140 RRASLAERL---VP----AGEAAPEPPPKVPEPPKIKEPL--------SVLEILGLIQRRELARA 189

  Fly   144 HQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKP 208
            .:.:.:||             .:..|..:....|....|..:.:.|:::|..::..:|    ..|
  Rat   190 DEHILELE-------------AEAPAEAEAGAGRRARDVALLYEALQRELWALVRESL----AAP 237

  Fly   209 ---TIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEER 270
               |..|..|.::         .||:::......||..:..|....:     .:.|....:|||.
  Rat   238 GPGTGAVAQLGLV---------LLQEEEADARRGPGAARKLRAHWAE-----AVARAARERLEEA 288

  Fly   271 A--DNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGL 333
            |  ..:..|...||.||..:|||:..|:....|.:|........|::.|||.|:.:|....|..|
  Rat   289 AAPGARGTLSGQLEALRARLLEDVAAVRGRLAPAYPAGLRAGAVYLRGYHEALAEWLGAAARRRL 353

  Fly   334 EGNEYVSMMAWVTHTYPGVELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTK 398
            ...:..:::.|....||. |::...|:....:.::|.||....|:.||||.:.:::...:..:.:
  Rat   354 PLADRYALLHWHNQVYPR-EILGLVDVVALENGELGPLLSAGTLRGLEDECVTDVKAQTRAALLR 417

  Fly   399 AAETEKQEWFTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQ 463
            ..:.::::|       ...:|..::....:.:::::|.:....|.||...:.....:..:..|.|
  Rat   418 VLQEDEEQW-------GSMDYRPSNLAQDVCELLEEHTERAPHISQEFVERMAYCCLGGLAEFLQ 475

  Fly   464 TYLKNVIELKEH-HFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLL 527
            ::.:.|....|: ..|......|.:. .|::||....:..||:::.::..|:|....    |...
  Rat   476 SFQQRVERFHENPGVRELPSDTYISR-TISMVNCGPPLRSLAERLARVGPPESEPAR----EASA 535

  Fly   528 ATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEM 592
            ....|:.......|.|..|.:::.|||.|...|||:|:.|:|.|..||.........::...:::
  Rat   536 IALDRVTRLCHRVLAELLFQELQPHFNKLMRRKWLSSSEALDGIVGTLGAQALALRRMQDEPYQV 600

  Fly   593 VINEAQKLLAKRYIRALLSKRLSKPRAEC-DAITR-----KIKTEAKRFKLFFEKIAPKISLSDS 651
            ::.|..:.....|:|.||..||     .| .|.||     :::.:|.:.:..|.::..:....| 
  Rat   601 LVAELHRRALVEYVRPLLRGRL-----RCRSARTRSRMAGRLREDAAQLQRLFRRLESQAYWLD- 659

  Fly   652 PLDLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYI---RNDVKAAEVREKVQDAM 712
              .::..|:.:|. .|...:.:::..|:..||.:...|:..|..|   ||.....|:....:|..
  Rat   660 --QVVPHLAEILQLEDTPSIQVEVGVLVRDYPDIRRKHVAALLDIRGLRNTAARQEILAVARDLE 722

  Fly   713 KSKKAMVSIAKQDCIFKEI 731
            .|:...:|.::....|.:|
  Rat   723 LSEGGALSPSRDRAFFADI 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 117/567 (21%)
Exoc3l2XP_038956763.1 Sec6 214..721 CDD:418703 113/545 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.