DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and tnfaip2b

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_697839.5 Gene:tnfaip2b / 569366 ZFINID:ZDB-GENE-081107-56 Length:613 Species:Danio rerio


Alignment Length:690 Identity:131/690 - (18%)
Similarity:276/690 - (40%) Gaps:136/690 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YDALEVVREENTK-HS-QYATAMENLK-HIFNVDASVQKTMALIEDDKLLNAHQCLADLENSRDD 156
            :..|.:.::...| || :..|..:||| |.| |||..|   .::.:|:|....|         |.
Zfish     5 HGVLNLFKKNGKKSHSPEIPTFKQNLKAHRF-VDACKQ---LILREDRLFVLKQ---------DG 56

  Fly   157 LLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIERE 221
            :..::....::..|:....|.:.:.::.|.|.||..|.|       ..:::..::..|:..:..|
Zfish    57 IGSKMRLVEEEEDSEARLAKDYEDLLECVRQTLENSLEL-------QSKEEQEMLKEAVHAVLEE 114

  Fly   222 EKND----QFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEERADNKMWLVRDLE 282
            ||.|    .|..:|:      |..||:..:::...:|:..|..|:|.:.::...|.:..:.:.:.
Zfish   115 EKQDIRWEGFQEKQR------PSWRPRRCKQIHEALLEMLVQRRMEEAPIDLSIDVRSSMQQSII 173

  Fly   283 ILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTH 347
            ...:.:.|||..|.:....|:|...::...|...||:..::.|..:....|...:.|.::.||..
Zfish   174 CKAKRLKEDLLKVVTWVSCCYPEELNVCQFYATLYHKAFAARLREVAEFTLCDEDCVLILQWVNQ 238

  Fly   348 TYPGV----ELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWF 408
            .||.:    |:....|     ..::..||..:.|..||.::|.|.:|...:.:....:.|:..|.
Zfish   239 DYPSILNCREIKERID-----QAKLDPLLPEDLLAPLEQQFLSNEKREVSKCLHNILDREETAWR 298

  Fly   409 TETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQTYLKNVIELK 473
            ...:|...::.|.....:.:.|...:|::.|..:..:.| ||..::.|.     ..:||   :.:
Zfish   299 DGKLPQLMDQVYCCPQAIDVIQFFHRHVEFTEQVLGDKT-KARRITCQM-----SNFLK---DYR 354

  Fly   474 EHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAA 538
            ..|.:              ::.:.|...|:...:...|..:.|                      
Zfish   355 AFHAK--------------VIKSKQPNTEVVLMVNLSYLIQCR---------------------- 383

  Fly   539 SYLLEEAFLDME------------------CHF--------NDLF----TAKWLASNIAV-DTIC 572
            .|:::.|.|..|                  |:|        .||:    :.:||.::..| :.:.
Zfish   384 DYIIKNAHLFPEDVKTDCLSLLTGMTESSHCYFTSNMHREMKDLYRKVGSNEWLKNSKGVCEKLL 448

  Fly   573 VTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKL 637
            ..||.:.|.:|:|.....:.::....|.....|||.::.:::.        ::.|.:.:.....|
Zfish   449 AKLDRHIQKFNNLDKTCCQELLGRIHKEFLAEYIRKMMKQKIK--------LSNKEQQQLAASAL 505

  Fly   638 FF--EKIAPKISLSDSPL----DLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYI 695
            .|  |:|...::.:.|.:    |::..|:.||. .|.:.:.|:|..|:.:||.|:|.|:.....:
Zfish   506 CFNSERIHTFLTSAGSNMDWLKDILPKLAGLLKLQDPDSVKLELVNLMRAYPDLSERHISAWLKL 570

  Fly   696 RNDVKAAEVREKVQDAMKSKKAMVSIAKQDCI-FKEIVFS 734
            :.::..::::..::....|::.|  ...||.: |.:..||
Zfish   571 KGNLSPSDLKMILKSVACSQEEM--SGNQDLLDFSKSFFS 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 109/598 (18%)
tnfaip2bXP_697839.5 Sec6 72..596 CDD:303062 107/596 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594427
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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