DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and tnfaip2a

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_005160524.1 Gene:tnfaip2a / 567159 ZFINID:ZDB-GENE-041210-301 Length:716 Species:Danio rerio


Alignment Length:763 Identity:152/763 - (19%)
Similarity:313/763 - (41%) Gaps:149/763 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGV------------------ 60
            ||:.:..:..|.|.|....:|:.:...|...:        ||...|.                  
Zfish     2 ALRRVMEVWTRSGSLLSTYRYKEKDLGKGEEI--------QGDEHGAEENPEAQYEKQNHKFKIP 58

  Fly    61 -RVGLKQLETCMQDVREVRRRMDEVERLLRGVPEV----YDALEVVR------EENTKHSQYATA 114
             .:.:|.|.|        .:|..:.|.:.|  |||    ::|:|.:.      ||.::.|:...|
Zfish    59 KNIKMKNLIT--------SKRNSKSEAVFR--PEVVDVDFEAIECIADSPEDPEEKSQKSKIKIA 113

  Fly   115 -----MENLKHIFNVDASVQKTMAL-----IEDDKLLNAHQCLAD-------------LENSRDD 156
                 .:.:|...|.......:::|     :|.::|.:|.|.|..             .|:..|.
Zfish   114 NKIKLPDFMKRQKNSKYPEAPSVSLDFNGNLEQNRLADAQQLLVKAEERLFGSNNLGRTEDEEDK 178

  Fly   157 LLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIERE 221
            ||.:         |:....:..|..:|:.::|.::.|:..|                 :.|::.|
Zfish   179 LLRD---------SEIFRERLKFAILDSFNEENQETLKSAL-----------------ISILQEE 217

  Fly   222 EKNDQFA--LQQQKVTGFLPPGRPKAWRRMIMDVLQQSVI-TRIEGSKLEERADNKMWLVRDLEI 283
            .::.::|  .:.|:     |..||...|:.|.|.|.:::: ||::.:..:|...:|:......|:
Zfish   218 AQDRRWAEVSENQR-----PIWRPTECRQKIHDPLLKTLVETRLKNADGQENKADKLSTSLKREV 277

  Fly   284 LR--QIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVT 346
            .|  :.:.:||.:|......|:|..:||...|.:.||:..|:.|..:.||.:|..:...:::|:.
Zfish   278 CRTGKQVQKDLLIVVRNLKECYPADFDICRTYAQLYHQTFSARLQELTRSSIEFEDCAYILSWIK 342

  Fly   347 HTYPGVELMSHPDLNVDVHRQ-IGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWFTE 410
            ..|| .:::.|.:|...::.. :|.||..||||.|||:|....:...:.|::.|.:.|..:|...
Zfish   343 IYYP-KDVLKHKELEQHINSSLLGPLLPEEHLKRLEDQYFSCKENEVRNWLSNAFDKEVDKWSDG 406

  Fly   411 TVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTI--HQELTFKALVMSIQQVEIFGQTYLKNVIELK 473
            ..|:..|..|..:..|.:..:|:..::..|.:  .:..::..|.:....:..:| |.||.:::.|
Zfish   407 FEPELIEGCYFGNLAVDVLPLIEGTVKEVNALLECESKSWSLLCLLDSSLLSYG-TSLKELVKRK 470

  Fly   474 EHHFRN--RD---QIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHY--ED-FERLLATF 530
            :.:...  ||   .|..|.:|:                        .:.||:  || ....::..
Zfish   471 QENIPKILRDSLVNIYVFKNYV------------------------QKVEHFFLEDTITTRMSIL 511

  Fly   531 QRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNI-AVDTICVTLDDYFQDYNHLRPNNFEMVI 594
            ..:|....:|.|.....:::..:..|:|..|.|.|. .|:.:...::....|:..|:|...|.::
Zfish   512 MDLRNICHTYFLSRIHKELKPVYRKLWTQTWFAGNSEVVEELVKAIEKISNDFKDLKPACREELL 576

  Fly   595 NEAQKLLAKRYIRALLSKRLS-KPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPLDLIST 658
            .|....:...|:|.::.::|. |.:.:.:|....:..::......|.|:..|   .|....::..
Zfish   577 AELHVEVMVEYVRRMMKRKLKLKDKEKQEAAAEFMSQDSNEICSVFIKLGSK---EDWLSKILPK 638

  Fly   659 LSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVR 705
            ||.:|. .|...|.:::.||...||.::|.|::.|..::.::.::::|
Zfish   639 LSEILKLQDPGSLQIEIATLARDYPDISEQHVLALLNLKANISSSDLR 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 114/546 (21%)
tnfaip2aXP_005160524.1 Sec6 177..709 CDD:283659 118/570 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594431
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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