DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and tnfaip2a

DIOPT Version :10

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_005160524.2 Gene:tnfaip2a / 567159 ZFINID:ZDB-GENE-041210-301 Length:716 Species:Danio rerio


Alignment Length:687 Identity:135/687 - (19%)
Similarity:300/687 - (43%) Gaps:89/687 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ARKKASVEALLKTGMQGQLDGVRVGLKQLETCMQDVREVRRRMDEVERLLRGVPEVYDALE---- 99
            ::|.:..||:.:.      :.|.|..:.:| |:.|..|     |..|:..:...::.:.::    
Zfish    69 SKKNSKSEAVFRP------EVVDVDFEAIE-CIADSPE-----DPEEKSQKSKIKIANKIKLPDF 121

  Fly   100 VVREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADLENSRDDLLYELHKQ 164
            :.|::|:|:.:..:...:.......:........|::.::.|.....|...|:..|.||.:    
Zfish   122 MKRQKNSKYPEAPSVSLDFNGNLEQNRLADAQQLLVKAEERLFGSNNLGRTEDEEDKLLRD---- 182

  Fly   165 PKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFA- 228
                 |:....:..|..:|:.::|.::.|:..|                 :.|::.|.::.::| 
Zfish   183 -----SEIFRERLKFAILDSFNEENQETLKSAL-----------------ISILQEEAQDRRWAE 225

  Fly   229 -LQQQKVTGFLPPGRPKAWRRMIMDVLQQSVI-TRIEGSKLEERADNKMWLVRDLEILR--QIIL 289
             .:.|:     |..||...|:.|.|.|.:::: ||::.:..:|...:|:......|:.|  :.:.
Zfish   226 VSENQR-----PIWRPTECRQKIHDPLLKTLVETRLKNADGQENKADKLSTSLKREVCRTGKQVQ 285

  Fly   290 EDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTYPGVEL 354
            :||.:|......|:|..:||...|.:.||:..|:.|..:.||.:|..:...:::|:...|| .::
Zfish   286 KDLLIVVRNLKECYPADFDICRTYAQLYHQTFSARLQELTRSSIEFEDCAYILSWIKIYYP-KDV 349

  Fly   355 MSHPDLNVDVHRQ-IGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWFTETVPDQDEE 418
            :.|.:|...::.. :|.||..||||.|||:|....:...:.|::.|.:.|..:|.....|:..|.
Zfish   350 LKHKELEQHINSSLLGPLLPEEHLKRLEDQYFSCKENEVRNWLSNAFDKEVDKWSDGFEPELIEG 414

  Fly   419 YYHTSAPVIIFQMIDQHLQVTNTI--HQELTFKALVMSIQQVEIFGQTYLKNVIELKEHHFRN-- 479
            .|..:..|.:..:|:..::..|.:  .:..::..|.:....:..:| |.||.:::.|:.:...  
Zfish   415 CYFGNLAVDVLPLIEGTVKEVNALLECESKSWSLLCLLDSSLLSYG-TSLKELVKRKQENIPKIL 478

  Fly   480 RD---QIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAASYL 541
            ||   .|..|.:|:              |:::..:...:||..       ::....:|....:|.
Zfish   479 RDSLVNIYVFKNYV--------------QKVENFFSEDTRTTR-------MSILMDLRNICHTYF 522

  Fly   542 LEEAFLDMECHFNDLFTAKWLASNI-AVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRY 605
            |.....:::..:..|:|..|.|.|. .|:.:...::....|:..|:|...|.::.|....:...|
Zfish   523 LSRIHKELKPVYRKLWTQTWFAGNSEVVEELVKAIEKISNDFKDLKPACREELLAELHVEVMVEY 587

  Fly   606 IRALLSKRLS-KPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPLDLISTLSALLS-SDIE 668
            :|.::.::|. |.:.:.:|....:..::......|.|:..|   .|....::..||.:|. .|..
Zfish   588 VRRMMKRKLKLKDKEKQEAAAEFMSQDSNEICSVFVKLGSK---EDWLSKILPKLSEILKLQDPG 649

  Fly   669 LLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVR 705
            .|.:::.||...||.::|.|::.|..::.::.::::|
Zfish   650 SLQIEIATLARDYPDISEQHVLALLNLKANISSSDLR 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:450399 113/543 (21%)
tnfaip2aXP_005160524.2 None

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