DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l2b

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_009289980.1 Gene:exoc3l2b / 565839 ZFINID:ZDB-GENE-100728-5 Length:917 Species:Danio rerio


Alignment Length:739 Identity:143/739 - (19%)
Similarity:316/739 - (42%) Gaps:112/739 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KKASVEALLKTGMQGQLDGVRVGLKQLETCMQ-DVREVRRRMDEVERLLRGVPEVYDALEVVREE 104
            :::|..:||:  |.|:....:..|...|.|.: |.....||:..::.:.:|        ::.||.
Zfish   201 RRSSEGSLLR--MAGRCKDRKESLTNGELCSETDADSTSRRLSFLKMVGKG--------KMKRES 255

  Fly   105 NTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADLENSRDDLLYELH----KQP 165
            ...||......|.::.:  .:...::.::::|          :..|...||..|.:.|    :|.
Zfish   256 LQDHSSQGPEEEPVEEV--PEVKPREPLSVLE----------ILQLVTKRDLFLADTHILELEQE 308

  Fly   166 KQHA--------------SDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALR 216
            .:.|              |.|.:.:|..:.|:.:.:.|:|:|..::..:|......|.:.: .::
Zfish   309 CREAESPTAGGTEDFSSPSSKDSSRRKAKDVELLYEALQKELWDVVRDSLRCPTAGPNLGL-VVQ 372

  Fly   217 IIEREEKNDQFALQQQKVTGFLPPG-RPKAWRRMIMDVLQQSVITRIEGSKLEERADNKMW-LVR 279
            ::::||:.|:...|.:   |..|.| ||:.:|:.     .:..:..:..:.|.:.|:.:.. |..
Zfish   373 VLQQEEQADRDWAQSE---GAAPGGPRPREFRKR-----WKEAVVELADANLPQHAEARAGELAT 429

  Fly   280 DLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAW 344
            .|:.||..::|||...:...|..:|..||.|..|.:.||:.::..|..:....|:..:..|::.|
Zfish   430 FLDKLRVRMVEDLGAARRNAVSVYPAEYDSFQVYTQSYHQAVTRRLQALTNGDLQITDIYSLLDW 494

  Fly   345 VTHTYP----GVELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQ 405
            :.:.|.    |...::.| :|:.   |:|.||..|.:..||.:.|.:::......:::..|.|::
Zfish   495 LYNIYNRDVLGTVTITTP-INLS---QLGPLLPTETVDKLELDCLNSVRGKVTNELSQVLEEEEK 555

  Fly   406 EWFTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSI-----------QQVE 459
            .|. :|:  ..|||....|..:| |.:.:.|:.:..:::.|..:....|:           ::||
Zfish   556 RWL-DTL--NIEEYQIPLARTVI-QRLQEDLERSAAVNRHLGSRVAQCSLNGLADFLYSFQRKVE 616

  Fly   460 IFGQTYLKNVIELKEHHFRNRDQIKYFTHYI---ITIVNNSQQMVELAQQMKQLYWPKSRTEHYE 521
            :|.:..:.:..|       |.|      .||   |.:.|.........|:..|.  ..|.:|  :
Zfish   617 MFHEMLVSSFGE-------NED------GYIAKTIALANCCPSFRSFVQRCGQC--DPSTSE--D 664

  Fly   522 DFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLR 586
            ...|..:...||...:...|.:..|..:...|:.|...|||::....:.|...:.::|:.:..:.
Zfish   665 SIRRANSALDRIVNLSVRVLNDRLFEHIRPFFDKLIKRKWLSNTEPFEQIEALIKEHFKKFRRMD 729

  Fly   587 PNNFEMVINEAQKLLAKRYIRALLSKRLSKPRAECDAI------TRKIKTEAKRFKLFFEKIAPK 645
            ...:|:::.|..:.:...|:||::..|:.     |.::      ..:::.|.|..|..|:::...
Zfish   730 NPPYEVLVVEVHRRVMTEYVRAIMRGRII-----CTSLKMRKRMAGRLRDEGKHLKTLFKELESS 789

  Fly   646 ISLSDSPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVREKVQD 710
            .|..||.:..:|.:  :|..|...:.:::..|:..:|.:...|:..:..||...:..| |:::.:
Zfish   790 ASWLDSAIPHLSEI--ILLEDTPSIQMEVGVLVREFPDIRRKHVSAILNIRGMTRQTE-RQEILN 851

  Fly   711 AMK---SKKAMVSIAKQDCIFKEI 731
            .:|   :..::..:::...:|.|:
Zfish   852 IVKDIENSDSVARVSRDRALFAEV 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 114/580 (20%)
exoc3l2bXP_009289980.1 Sec6 338..875 CDD:303062 114/578 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594428
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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