DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l4

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001138266.1 Gene:exoc3l4 / 563246 ZFINID:ZDB-GENE-081028-71 Length:787 Species:Danio rerio


Alignment Length:650 Identity:141/650 - (21%)
Similarity:265/650 - (40%) Gaps:55/650 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PEVYDALE---VVREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADLENS 153
            |||.|..|   |:...:|    |.     |..|..:..||.:...|||.:.|..|:..|..|.  
Zfish   159 PEVADECEGQMVLELRDT----YV-----LPEIPAMPLSVMEINKLIEMEVLEEAYVNLLSLR-- 212

  Fly   154 RDDLLYELHKQPKQHASDKITLKR-HFEK-VDTVSQELEKKLRLILSRTLNTL--RKKPTIIVTA 214
                 .||.:|.|....:...::. |.|| :..:...|..|:..|: |..:||  |.|..::..|
Zfish   213 -----LELQQQRKSQNQEDCPIELVHKEKDLSLLYGTLRNKMSDIV-RNSSTLPSRNKELLVYVA 271

  Fly   215 LRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEERADNKMWLVR 279
            ..|:|.|::.|:             ||..:.||......::..|...::...|:.|..|..||..
Zfish   272 YIILEEEKRQDE-------------PGAMQGWRESWRVAVRDGVRDTLKRVHLDTREQNISWLAV 323

  Fly   280 DLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAW 344
            .|.:|.:.|||||..||:..|..:||.:::|..||..:||.:..:|..::....|..:|.:::.:
Zfish   324 HLGLLGKAILEDLERVKTELVSSYPPEFNVFETYVSCHHEAVGEHLKTLLEKVTELKDYYALLDF 388

  Fly   345 VTHTYPGVELMSHPDLNVDVHRQIGTL-LRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQE-W 407
            :.|.||..::|....|..:|......| |..:.|..::.:|...:|.:.:..:.:..|.|.:| |
Zfish   389 IIHRYPSEKIMGSTSLQPEVKEDNRALPLDNDFLNQIKMKYCSRLQVDMRTSLDRVIELENEEIW 453

  Fly   408 FTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQTYLKNVIEL 472
            .....|:.||..|.:...:.|:..|..|:|.:..|...|..:.:...:.:::.|.:.:....:| 
Zfish   454 KERRKPEIDEGIYSSHIDMDIWTNIKGHVQGSRRIDVTLEKEVVRSCLDELKSFPKRFESAFVE- 517

  Fly   473 KEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHA 537
               ..|.......:..|.|:.:|:...:.|..:..||        ......|::......:....
Zfish   518 ---SCRVFSNSSLWAEYHISYINSFSDLKEHMEGYKQ--------SCQIQLEQVRKEIDGLTTRL 571

  Fly   538 ASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLA 602
            ...|:|:...|::.......|.||.:.:.....:...:....:...::.|...:..:||....:.
Zfish   572 RQTLMEQFKTDVKPFLRRQMTGKWFSFDEDFSQLATRIKSLSEQSKYMSPKYRQAFVNEVHFFVV 636

  Fly   603 KRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPLDLISTLSALLSSDI 667
            |.|:..|:....|....:.:....||..:.:..|..|:.:...:....|..:.:|.:.....||:
Zfish   637 KEYVSQLMKNNYSCKNRKNETAAAKITKQWEELKEIFQDMHSTLDWLHSVGNHLSQIIGCKKSDV 701

  Fly   668 ELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVREKVQDAMKSKKAMVSIA-KQDCIFKEI 731
            :   .:|..|:.:||.:...||..:.|.|..::..|....:|...:.|:::.|.. |:..:|.||
Zfish   702 K---HNLKPLVENYPDIRRSHLSAVLYFRGIIRGREKHVILQRLAELKQSLGSSGNKEQALFSEI 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 115/557 (21%)
exoc3l4NP_001138266.1 Sec6 237..763 CDD:303062 113/554 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594425
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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