DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec6 and exoc3

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001005685.1 Gene:exoc3 / 448187 XenbaseID:XB-GENE-972389 Length:747 Species:Xenopus tropicalis


Alignment Length:745 Identity:292/745 - (39%)
Similarity:458/745 - (61%) Gaps:30/745 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LEEQARQA---ALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQL 67
            :||..|:|   |::.:..|||||.||:||||||.|.|||||||||.||..:|.||||||.||.||
 Frog     1 MEEPDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLNQL 65

  Fly    68 ETCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTM 132
            ...:.||:::::.:.:|.:..|......::|:.|::...:|||.|.|:||||:||:|...|::|.
 Frog    66 HNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQ 130

  Fly   133 ALIEDDKLLNAHQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLIL 197
            .|||..:||.||:.|.|||.|||||:||.::...::..|...::.:|.||..:|:||.|:|.:::
 Frog   131 DLIEQGELLQAHRKLMDLECSRDDLMYEQYRMDSKNTHDMNLIQNYFGKVHPLSEELAKQLWMVI 195

  Fly   198 SRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRI 262
            .|::.|:|:.||::|:.:||||||||.|:..:.::|.|||:||||||.|:..:.|||.:::||||
 Frog   196 QRSIVTVRRDPTLLVSVVRIIEREEKVDRRMMDRKKQTGFIPPGRPKKWKDKMFDVLDKTIITRI 260

  Fly   263 EGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDN 327
            |||:.:.|..:||||||.|||:|:.:||||.::|:|.|.||||.|:||...:..||:.|||.:..
 Frog   261 EGSQADTRESDKMWLVRHLEIIRRYMLEDLIIIKNLMVQCFPPSYNIFNRVLDLYHQALSSRIQE 325

  Fly   328 IVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDLNVDVH-RQIGTLLRPEHLKALEDEYLQNMQRN 391
            :....||.||.||::.||.:||..||:|.:|:|..::: :.:..||..:.:..|..:|:..::.|
 Frog   326 LASEELEANEIVSLLTWVLNTYQSVEMMGNPELIPEINVKSLKPLLSQDIVDQLLHKYMATLRSN 390

  Fly   392 FQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSI 455
            ...|:.||.||:|::|...|.|:.|:: |:.|:.|.|:|||.:|:|||...|..:|..|.|.:.:
 Frog   391 IIAWLRKALETDKKDWDKNTEPEADQDGYFQTTLPAIVFQMFEQNLQVAAQISDDLKKKVLHLCL 455

  Fly   456 QQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHY 520
            ||:..|...|.:.....||.|.|:|.....:..|:|.|:||.|...|....:|:.|        .
 Frog   456 QQMNTFLNRYAEEAQLYKEDHLRSRQHPACYVQYMIAIINNCQTFKESIVSLKRKY--------L 512

  Fly   521 EDFERLL--------ATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDD 577
            .|.:.::        .|...|.......||:|.|:|:|.|.|||.|.|||..:..|||||||::|
 Frog   513 RDEDDIIGFGSSAMDTTLDSIANDGCCSLLDEVFMDLEQHLNDLMTRKWLGGSNTVDTICVTIED 577

  Fly   578 YFQDYNHLRPN-NFEMVINEAQKLLAKRYIRALLSKRLSKPRAE--CDAITRKIKTEAKRFKLFF 639
            ||.|:..::.: |.||.|...:|::.: ||:|::.||:|...||  .:...:.|| ||::||..|
 Frog   578 YFNDFAKIKTHYNQEMTIKAHRKVVTE-YIKAIMQKRISFRNAEERKEGAEKMIK-EAEQFKFLF 640

  Fly   640 EKI-APKISLSDSPLDLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAA 702
            ::: |..|..:|...:.|..::.:|. :|..||.|::.||:|.||.|.:||:..|..:|.|. :.
 Frog   641 KRLTAGFIEDTDGLCNTIIDIAEVLKLTDPSLLYLEVSTLVGRYPDLRDDHIAALLAVRGDA-SR 704

  Fly   703 EVREKVQDAMKSKKAMVSIAKQDCIFKEIV 732
            |:::.:.:.::..:...| |....|||:|:
 Frog   705 EMKQTIIETVEQSQRQQS-ANYTPIFKDII 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 211/566 (37%)
exoc3NP_001005685.1 Sec6 177..732 CDD:283659 211/566 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 378 1.000 Domainoid score I842
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H38296
Inparanoid 1 1.050 525 1.000 Inparanoid score I1220
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D335038at33208
OrthoFinder 1 1.000 - - FOG0002440
OrthoInspector 1 1.000 - - oto104619
Panther 1 1.100 - - LDO PTHR21292
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1313
SonicParanoid 1 1.000 - - X4764
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

Return to query results.
Submit another query.