DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and Tnfaip2

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001131105.1 Gene:Tnfaip2 / 299339 RGDID:1594556 Length:691 Species:Rattus norvegicus


Alignment Length:685 Identity:149/685 - (21%)
Similarity:278/685 - (40%) Gaps:106/685 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 DALEVVREENTKHSQYATAMENLKHIFN------------VDASVQKTMALIEDDKLLNAHQCLA 148
            :|.|...|...|..:.:..:.|:..:|.            .|..||......||..|....:...
  Rat    55 EAPEGEEESAKKKEKKSKGLANMFSVFTKGKKKKKDQPRLSDPEVQSKSRPEEDGPLPTVEELKE 119

  Fly   149 DLENSRDDLLYELHKQPKQHASDKITLKRHFEKV----DTVSQEL---EKKLR----LILSRTLN 202
            .||..|.::.:::           :.|:|..|..    .|..:||   :.|:.    |:..:.|.
  Rat   120 ALELGRLEVAWQV-----------LALERQLEAAAAAGGTSDEELVWRQSKVEALYVLLRDQVLR 173

  Fly   203 TLRK----KPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIE 263
            .||:    .|..:..||.::.:||..|:.|.:....|. |...||:.|.::...|:.:....|::
  Rat   174 VLRRPLEAAPERLSQALAVVSQEELEDRRASRGPLATA-LAITRPRRWLQLWRGVVAEVAAERLD 237

  Fly   264 GSKL-----EERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSS 323
            ....     ...|:|     |.|.:.| .:.||:.||.....|.||..:::...|.:.|||..::
  Rat   238 AQPAFVPEGRSEAEN-----RFLHMGR-TMREDMEVVVERLKPLFPEEFNVVHTYAESYHEHFAT 296

  Fly   324 YLDNIVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDLNVDVHR-QIGTLLRPEHLKALEDEYLQN 387
            :|..:.:..|...:...::.||.:.||. ::::.|.|..::.. ::|:||.|:.::.||..:|.|
  Rat   297 HLCTLAQFELCERDTYLLLLWVQNFYPN-DILNSPKLAQELQGIRLGSLLPPKQIRLLEAVFLSN 360

  Fly   388 MQRNFQEWMTKAAETEKQEWFTETVPDQDEEYYHTSAPVIIFQMIDQ------------HLQVTN 440
            ...|.::.||:|.|.|.|.|..:..|...:...|:...:.|.|:|.|            .:|:..
  Rat   361 EVTNVKQLMTRALELESQRWAQDVAPQSLDGRRHSELAIDILQIISQGQTKAENITSDVGMQIKQ 425

  Fly   441 TIHQELTFKALVMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQ 505
            .:..||.  ||:.|.|:|  |.:...|:               |...:|.:.|:.|....:....
  Rat   426 LLLVELA--ALLRSYQRV--FDEFLEKS---------------KLLRNYRVNIIANINNCLSFRT 471

  Fly   506 QMKQLYW--PKSRTEHYEDFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAV 568
            .::| .|  |:      :...||:...:.::||....||:..|.|::..|......:|......:
  Rat   472 SVEQ-RWQIPQ------DSLNRLVEPLKDLKAHGFDTLLQSLFSDLKPLFKKFTQTRWAKPVETL 529

  Fly   569 DTICVTLDDYFQDYNHLRPNNFEMVINEAQKL-LAKRYIRALLSKRLSKPRAE-CDAITRKIKTE 631
            :.|..|:.....:::.|: :.|...:.||..| |.|.||..|..:||....|| ...:.:.|...
  Rat   530 EEIITTVSVSLPEFSELQ-DCFREELMEAVHLHLVKEYIIRLSKRRLVLKTAEQQQQLAKHILAN 593

  Fly   632 AKRFKLFFEKIAPKISLSDSPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIR 696
            |...:.|..:.....:...:.|..||.:..|  .|...:.:::.|....||..::.||..:..|:
  Rat   594 ADTIQHFCTENGSTATWLHAALPTISEIIRL--QDPSAIKIEVATYATWYPDFSKGHLNAILAIK 656

  Fly   697 NDVKAAEVRE---------KVQDAMKSKKAMVSIA 722
            .::.::|||.         .||:..:...:::.:|
  Rat   657 GNLPSSEVRSIRNILDINTGVQELSRPLFSLIKVA 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 132/590 (22%)
Tnfaip2NP_001131105.1 Sec6 157..688 CDD:399204 127/567 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352496
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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