DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and Exoc3l1

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001099648.1 Gene:Exoc3l1 / 291961 RGDID:1311132 Length:743 Species:Rattus norvegicus


Alignment Length:729 Identity:177/729 - (24%)
Similarity:336/729 - (46%) Gaps:62/729 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQLE 68
            ::.|:.||.||||....:..||.||.::.|||.|..::..|:||.:|:.:|..|:||:.|:.||.
  Rat    28 ERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQRNYSLEARIKSAVQSYLEGVQTGVWQLT 92

  Fly    69 TCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTMA 133
            ..::.|:..|..:.:...||:|:.:....||.:||...:|.|.....:.|..:..|.|:|..|..
  Rat    93 QALEAVQGTREALRQAHHLLQGLSQTSQTLEPMRECVVQHKQLQILTQLLPRLQAVPAAVAHTQT 157

  Fly   134 LIEDDKLLNAHQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILS 198
            ||:..:.|.|:..|.:||..:::....|       ...::.:   |:::..:::.|.:.:.....
  Rat   158 LIDAQRFLEAYVNLRELEQLQEETWTPL-------GGLELPI---FQELGLLAEALGQAVEAAAG 212

  Fly   199 RTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSV-ITRI 262
            ......|:.||::|.|:|:.|.|        .::.:.|    ..|:.||:..:..||:.: ....
  Rat   213 AAGRLAREDPTLLVAAIRVAEVE--------TERTILG----QAPRDWRQRCLRALQEGLEQLHF 265

  Fly   263 EGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDN 327
            ....|.|......|    ||.|:..:..:|...::|..||.||.|.:...:....|.||...|..
  Rat   266 ASPVLPEPGALSGW----LEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGLRRSLQQ 326

  Fly   328 IVRSG--LEGNEYVSMMAWVTHTYPGVELMSHPDL--NVDVHRQIGTLLRPEHLKALEDEYLQNM 388
            :: ||  |...:..:::.|..|.|.|.|:|.:.:|  ..|| .|:..||..|:::.||..::..:
  Rat   327 LL-SGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADV-SQLEPLLTSENIEQLEAAFVAQV 389

  Fly   389 QRNFQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALV 452
            |.:..:|:.||.:.|..||..|..|..|.. :||:..|.|:.|::.:::|||:.|...|..:...
  Rat   390 QVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSLHRRVHD 454

  Fly   453 MSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRT 517
            |::.::..|.:::..::|.....|.|......::..|::...|:...:    :....:..|...|
  Rat   455 MAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSAL----RSSVSVLLPDGET 515

  Fly   518 E--------HYEDFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVT 574
            .        ..:|.||.:...          :||....:::..|..|.:.:||.|:..:|::...
  Rat   516 SGVLAPVEAALDDVERRICRL----------VLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQ 570

  Fly   575 LDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLSKRL-SKPRAECDAITRKIKTEAKRFKLF 638
            ...:.:|:..:|....::::.|.::.:...|:|||:..|| .:...|......:::.:|.:.|..
  Rat   571 TLHFCKDFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKEL 635

  Fly   639 FEKIAPKISLSDSPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAE 703
            |..:..:.|...:|: |::....|...|..||.|::..|...:|.::|||:..|..:|.||.   
  Rat   636 FLGLGLEESAHCAPV-LLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVS--- 696

  Fly   704 VREKVQDAMKSKKA 717
             ||..|.|:.|.:|
  Rat   697 -REHRQAALSSLQA 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 127/554 (23%)
Exoc3l1NP_001099648.1 Sec6 193..726 CDD:399204 127/554 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352493
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D335038at33208
OrthoFinder 1 1.000 - - FOG0002440
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.810

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