DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec6 and Exoc3l

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_808456.1 Gene:Exoc3l / 277978 MGIID:3041195 Length:739 Species:Mus musculus


Alignment Length:721 Identity:182/721 - (25%)
Similarity:339/721 - (47%) Gaps:46/721 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQLE 68
            ::.|:.||.||||....:..||.||.::.|||.|..::..|:||.:|:.:|..|:||:.|:.||.
Mouse    24 ERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREIQRNYSLEARIKSVVQSYLEGVQTGVWQLT 88

  Fly    69 TCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTMA 133
            ..::.|:..|..:.:...||:|:......||.:||...:|.|.......|..:..|.|:|..|..
Mouse    89 RALEAVQGTREALSQAHHLLKGLSRTSQTLEPLRECVVQHKQLQILTRLLPRLQAVPATVAHTQT 153

  Fly   134 LIEDDKLLNAHQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILS 198
            ||:.::||.|:..|.:||..:::.|..|       ...::.:   |:.:..:::.|.:.:.....
Mouse   154 LIDSERLLEAYVSLRELEQLKEETLAPL-------GGLELPI---FQGLGLLAEALGQAVEAAAG 208

  Fly   199 RTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIE 263
            ......|:.|.::|.|:|:.|.|        .::.:.|    ..|:.||:..:..||:. :.|:.
Mouse   209 AAGRLAREDPALLVAAIRVAEVE--------TERTILG----QAPRDWRQRCLRALQEG-LERVH 260

  Fly   264 GSK--LEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLD 326
            .:.  |.|......|    ||.|:..:..:|...::|..||.||.|.:...:....|.||...:.
Mouse   261 FASPVLPEPGALAGW----LEALQVALPAELATAEALVAPCCPPSYRVVELWAHTLHSGLRRSVQ 321

  Fly   327 NIVRS-GLEGNEYVSMMAWVTHTYPGVELMSHPDL--NVDVHRQIGTLLRPEHLKALEDEYLQNM 388
            .::.. .|...:..:::.|..|.|.|.|:|.:.:|  ..|| .|:..||..|:::.||..::..:
Mouse   322 QLLAGPELGAADTFALLHWALHVYTGKEMMGNLELGPEADV-SQLEPLLTSENIEQLEAAFVAQV 385

  Fly   389 QRNFQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALV 452
            |.:..:|:.||.:.|..||..|..|..|.. :||:..|.|:.|::.:::||||.|...|..:|..
Mouse   386 QVSVAQWLKKALDGEVAEWSGEQEPPTDPSGFYHSPMPAIVLQILAENIQVTNLISDSLHRRAHN 450

  Fly   453 MSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRT 517
            |::.::..|.:::...:|.....|.|......::..|:::..|:..   .|...:..|......:
Mouse   451 MAVSELGAFLRSFSDALIRFSRDHLRGDAVAPHYVPYLLSAFNHQS---ALRSSVSVLLPDGEAS 512

  Fly   518 EHYEDFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDY 582
            ......|..|...||   .....:||...::::..|:.|.:.:||.|:..:|.:|.....:.||:
Mouse   513 GVLAPVEAALDDVQR---RICRLVLEVLQVELQPLFSALPSRRWLLSSELLDGVCEQTSHFCQDF 574

  Fly   583 NHLRPNNFEMVINEAQKLLAKRYIRALLSKRL-SKPRAECDAITRKIKTEAKRFKLFFEKIAPKI 646
            ..:|....::::.||::.:..:|:|||:..|| .:...|......:::.:|.:.|..|..:..:.
Mouse   575 WRVRKPGVQLLLAEAERTVVLQYLRALMQGRLVCRGTDERSQAAERLRQDAAQLKELFLGLGLEE 639

  Fly   647 SLSDSPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVREKVQDA 711
            |...:|: |::....|...|..||.|::..|...:|.::|||:..|..:|.||.    ||..|.|
Mouse   640 SAHCAPV-LLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVS----REHRQAA 699

  Fly   712 MKSKKA 717
            :.|.:|
Mouse   700 LSSLQA 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 130/546 (24%)
Exoc3lNP_808456.1 Mediates interaction with EXOC2, EXOC4 and EXOC5. /evidence=ECO:0000269|PubMed:18480549 1..370 96/373 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Sec6 189..722 CDD:368717 130/546 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 698..718 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848886
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 1 1.000 - - FOG0002440
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.810

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