DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and Exoc3

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001020135.1 Gene:Exoc3 / 252881 RGDID:621790 Length:755 Species:Rattus norvegicus


Alignment Length:743 Identity:284/743 - (38%)
Similarity:440/743 - (59%) Gaps:22/743 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQL 67
            :::.:.:|...|::.:..|||||.||:||||||.|.|||||||||.||..:|.||||||.||.||
  Rat    11 MKETDLEAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQL 75

  Fly    68 ETCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTM 132
            ...:.||:::::.:.:|.:..|......::|:.|::...:|||.|.|:||||:||:|...|::|.
  Rat    76 HNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQ 140

  Fly   133 ALIEDDKLLNAHQCLADLENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLIL 197
            .|||...||.||:.|.|||.|||.|:.|.::....:..|...:..:|.....:|.||.|:|.::|
  Rat   141 DLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNKRDMTLIHGYFGSTQGLSDELAKQLWMVL 205

  Fly   198 SRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRI 262
            .|:|.|:|:.||::|:.:||||||||.|:..|.::|.|||:||||||.|:..:..||.::|.|||
  Rat   206 QRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAVLDRTVTTRI 270

  Fly   263 EGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDN 327
            ||::.:.|..:||||||.|||:|:.:|:||.:.|:|.|.|||||||||...:..||:.||..:.:
  Rat   271 EGTQADTRESDKMWLVRHLEIIRKYVLDDLVIAKNLLVQCFPPHYDIFKNLLSMYHQALSIRMQD 335

  Fly   328 IVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDL--NVDVHRQIGTLLRPEHLKALEDEYLQNMQR 390
            :....||.||.||::.||.:||...|:|.:.:|  .|||: .:..||.|..:..|.|.|:..:..
  Rat   336 LASEDLEANEIVSLLTWVLNTYTSAEMMGNVELAPEVDVN-ALEPLLSPNVVSELLDTYMSTLTS 399

  Fly   391 NFQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMS 454
            |...|:.||.||:|::|..||.|:.|:: ||.|:.|.|:|||.:|:|||...|.::|..|.||:.
  Rat   400 NIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLC 464

  Fly   455 IQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYW-PKSRTE 518
            :||:..|...|.:.....||.|.|||.....:..|::.|:||.|...|....:|:.|. |::...
  Rat   465 LQQMNSFLSRYKEEAQLYKEEHLRNRQHPHCYVQYMVAIINNCQTFKESIISLKRKYLKPETEES 529

  Fly   519 HYEDFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYN 583
            ..:....:......|.....|.||||.|||:|.|.|:|.|.||:..:.|||.||||::|||.|:.
  Rat   530 LCQSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWMLGSNAVDIICVTVEDYFNDFA 594

  Fly   584 HLRPNNFEMVINEAQKLLAKRYIRALLSKRLS-------KPRAECDAITRKIKTEAKRFKLFFEK 641
            .::....:.:..||.:.:...|:||::.||:|       |..||      |:..||::.:..|.|
  Rat   595 KIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSAEERKEGAE------KMVREAEQLRFLFRK 653

  Fly   642 IAPKISL-SDSPLDLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEV 704
            :|..... :|...|.|..::.::. :|..||.|::.||:..||.:.:||:..|..:|.|. :.::
  Rat   654 LASGFGEDADGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLALRGDA-SRDM 717

  Fly   705 REKVQDAMKSKKAMVSIAKQDCIFKEIV 732
            ::.:.:.:: :..|.:......||:|||
  Rat   718 KQTIMETLE-QGPMQASPNYVPIFQEIV 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 206/564 (37%)
Exoc3NP_001020135.1 Sec6 187..743 CDD:399204 206/564 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352495
Domainoid 1 1.000 374 1.000 Domainoid score I850
eggNOG 1 0.900 - - E1_COG5173
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38296
Inparanoid 1 1.050 509 1.000 Inparanoid score I1274
OMA 1 1.010 - - QHG55512
OrthoDB 1 1.010 - - D335038at33208
OrthoFinder 1 1.000 - - FOG0002440
OrthoInspector 1 1.000 - - oto97927
orthoMCL 1 0.900 - - OOG6_103744
Panther 1 1.100 - - LDO PTHR21292
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4764
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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