DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and si:dkey-196h17.9

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_009305376.1 Gene:si:dkey-196h17.9 / 101883199 ZFINID:ZDB-GENE-141216-317 Length:546 Species:Danio rerio


Alignment Length:614 Identity:114/614 - (18%)
Similarity:226/614 - (36%) Gaps:174/614 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 KQHASDKITLKRHFEKVD----------------TVSQELEKKLRLILSRTLNTLRKKPTIIVTA 214
            |::.::|.:|.:..|:.:                |.:.|:..|      ::||.|:|        
Zfish    16 KKNGNEKKSLLKSIEQTEGGQAFENMSGGFPDLITANSEVSNK------KSLNFLKK-------- 66

  Fly   215 LRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRI-----EGSKLEERADNK 274
             .:.|.....|   :..:.|.||     |:.....::|...:....::     :||:|::..:  
Zfish    67 -ILSETSYPED---IDSEVVDGF-----PQKSNFEVIDEFVERNFPKLPEEGTKGSQLKQLRE-- 120

  Fly   275 MWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYV 339
              .::..|  .||..:.||:..:|      ....:....:..|...|.:.||.::...|.|.|..
Zfish   121 --FLKSAE--SQIYNDVLRLTPAL------KDTGLLDHLINNYFRLLFTKLDLLLNRNLSGEETF 175

  Fly   340 SMMAWVTHTYPGVELMSHPDLNVDVHRQIGTLL--------RPEHLKALEDEYLQNMQRNFQEWM 396
            .::.|      |.::....|..| |.|....||        :.:.|..|:||..:.:| |..:: 
Zfish   176 CLLRW------GNDVFFSSDSKV-VFRVCDPLLLTGWFERAKVKLLPELQDEISRRLQ-NILDY- 231

  Fly   397 TKAAETEKQEWFTETVPDQ------DEEYYHTSAPVIIFQMIDQHLQVTNTIHQELT----FKAL 451
                             ||      |||.:           |..||.|:..::..:|    |...
Zfish   232 -----------------DQHHRNQVDEETF-----------IRVHLDVSQCLNAVITNSKDFSDT 268

  Fly   452 VMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTH------------------YIITIVNNSQ 498
            :|.:.|          |:...:.|||     ::.:.|                  |::.:::..:
Zfish   269 LMCLAQ----------NICLQELHHF-----VEMYVHSEKKHIEKLQPLSTKHSVYLLRVISTCR 318

  Fly   499 QMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAASYLLEEAFLDM-ECHFNDLFTAKWL 562
            |:..||.|     :....|...:|...::...|::.....| |:::...:. :......|....|
Zfish   319 QLRFLAPQ-----FYNQDTNKTDDLLNIICMLQKMEDQVLS-LVQKMMKEFAQATLRRYFKHGDL 377

  Fly   563 ASNIAVDTI---CVTL--DDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLS---KRLSKPRA 619
            ..:|..:.|   |.:|  .|..::..       |:.:|.....:::.|:..|:.   |||.|...
Zfish   378 PIHILTEEIRNHCASLPQTDVGKEIR-------EIFVNVVYDCVSRVYLDCLMKSKRKRLEKTWG 435

  Fly   620 ECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPLDLISTLSALL-SSDIELLVLDLHTLLGSYPS 683
            :   :..:||.:|..|.:.|.::  :....|....|:..:|.:| ..|||.|.||..:|...:|.
Zfish   436 D---VGERIKEDAAHFHITFTQL--QNGSDDQNNQLLKRMSEVLCCDDIEALKLDCGSLFKDFPD 495

  Fly   684 LNEDHLVRLFYIRNDVKAAEVRE--KVQD 710
            .::.::..|...:..:...:||:  ||:|
Zfish   496 DSQQYVPGLLRWKGTLSKRQVRKVLKVRD 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 111/601 (18%)
si:dkey-196h17.9XP_009305376.1 Sec6 91..539 CDD:303062 97/516 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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