DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l4

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_017952464.2 Gene:exoc3l4 / 101734866 -ID:- Length:713 Species:Xenopus tropicalis


Alignment Length:654 Identity:139/654 - (21%)
Similarity:296/654 - (45%) Gaps:42/654 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GVRVGLKQLETCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFN 123
            |::.....|||.....:.:||...:..|.....||..:..|..:....|.|..::.....::...
 Frog    38 GIQKKSSFLETVGNIKKSIRRSRGQSARDDNSSPEKIETAEGSKSFKKKISFRSSKKSETENKIP 102

  Fly   124 VDASVQKT-----MALIEDDKLLNAHQCLADLENSR--DDLLYELHKQPKQHASDKITLKRHFEK 181
            .|::...|     ::::|.:.|:.........:::|  ::.|.|.:|....:..:..:|....:.
 Frog   103 EDSTADFTTKRELLSVMEINDLIKGCHLKEAFDSTRALEEKLLEEYKANNNNEKNIKSLTMRAKD 167

  Fly   182 VDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVT----GFLPPGR 242
            |:.:.:.|..:::.|:.|:|:........:|:|:.||:.||:.|   |:.|:|.    .|...|:
 Frog   168 VNILYKNLFAEIQSIVKRSLHEEDIDEQSLVSAIYIIKEEEEGD---LKNQQVAEENPDFSQIGQ 229

  Fly   243 PKAWRRMIMDVLQQSVITRIEGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHY 307
            .:.|:::..|.::::|..|:....:.| |||.:||...||.|:...::||..|||...|.:|..|
 Frog   230 RRQWKQLWKDTVKETVTERVGALPVNE-ADNTLWLANHLESLKTQTVQDLIKVKSFLKPLYPEDY 293

  Fly   308 DIFGEYVKFYHEGLSSYLD-NIVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDLNVDVHR-QIGT 370
            |:.|.|::.:|..||.:|. .:|....:.::..|.:.||.:||...:.:.:|:|..:|:. .:.:
 Frog   294 DVCGIYIRCFHNALSCHLQKTVVPKCKQYSQLYSFLNWVLNTYRSDDFIDNPELQPEVNNANLHS 358

  Fly   371 LLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWFTETVPDQDEEYYHTSA-PVI--IFQMI 432
            ||..|.|..|:::|.:.:|...:::|:.....|.::|..||  :.|||...|:. |:.  |.:|.
 Frog   359 LLDSECLSELKNKYNKELQETIKQYMSNILTLEIEKWNKET--EIDEEILKTNCLPIYIDIEEMT 421

  Fly   433 DQHLQVTNTIHQELTFKALVMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNS 497
            .:|::.:..:.::|...|....::::..|       .:.|:| .|....::...:.::..:|...
 Frog   422 GRHVRESAKLSEDLETSAFHTCMKELGNF-------ALSLQE-EFTQWSEVGITSLFLQNLVIYI 478

  Fly   498 QQMVELAQQMKQLYWPKSRTEHYEDFE-RLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKW 561
            ...::|.|...|     |..|..:..| ||....:.:..|..|...:|.    :.||..|.|.:|
 Frog   479 NSFIKLRQSTMQ-----SDAEACKKAEDRLTKAIKHLTKHFFSLFSKET----QPHFQKLITKQW 534

  Fly   562 LASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLSKRLSKPRAECDAITR 626
            :..:.|...|..:.::..::.|:|...:.:...|...:.|.|.|:..::.::|.....:....:.
 Frog   535 IRKDTAFKAIVKSAENLHKNLNYLAQPSHKEFANGIHRHLVKEYLTQVMKRKLRLNHLKRKKASD 599

  Fly   627 KIKTEAKRFKLFFEKIAPKISLSDSPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVR 691
            |:..|::...:..|.:..........:..||.:..|...  |.::..:..:..:||...|:|::.
 Frog   600 KMSQESEALNIIAETLGSDQDWLFPAIQYISDIIGLRKK--EDILEKIEIVFKTYPDCGEEHILA 662

  Fly   692 LFYI 695
            :.|:
 Frog   663 ILYL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 118/527 (22%)
exoc3l4XP_017952464.2 Sec6 167..701 CDD:418703 118/525 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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