DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l2

DIOPT Version :9

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_012824751.2 Gene:exoc3l2 / 100486119 XenbaseID:XB-GENE-982090 Length:780 Species:Xenopus tropicalis


Alignment Length:747 Identity:163/747 - (21%)
Similarity:306/747 - (40%) Gaps:144/747 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EQARQAALKDIQNMLQRPGQLEKVEQY-----------------RHRIARKKASVEALLKTGMQG 55
            |:.|:...:.:.:.::|.|.|||:...                 ..|..|:|:...:||..|.:.
 Frog    32 EEEREVKRESLGSDVKRRGTLEKIAGLSPFFKGGKGLLGGWGTPEKRRGRRKSEDVSLLSLGRKK 96

  Fly    56 QLD-------GVRVGLKQLETCM----------QDVREVRRRMDEVERLLRGVPEVYDALEVVRE 103
            .::       |...|:|:|....          |..|         |.::..|||..:|    .:
 Frog    97 DINVGDEGGGGPGGGVKRLSFLWLGGSSGSGGNQSQR---------ESMVEAVPERSEA----EQ 148

  Fly   104 ENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADLE------NSRDDLLYELH 162
            ||.|..:..:.:|.|:              ||:...|.:|.|.:.:||      .|.:..|    
 Frog   149 ENEKTREPLSVLEILQ--------------LIQCRDLRSADQHIIELEAECDGGTSPEGGL---- 195

  Fly   163 KQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLN---TLRKKPTIIVTALRIIEREEKN 224
            |.|.:.|.| :||         :.:.|.|::..::..:||   |..|...:|    .:|.:||..
 Frog   196 KSPGRQAKD-VTL---------LYEALMKEMWAVVEESLNNKGTHHKLDEVI----GVILQEEGR 246

  Fly   225 DQFALQQQKVTGFLPPGRP---KAWRRMIMDVLQQSVITRIEG--SKLEERADNKMWLVRDLEIL 284
            :.            |||..   :.|.:.|...::|.:...:||  ..|..:||.          :
 Frog   247 EG------------PPGTKDMRRQWMKAIGRSVEQRLKNNLEGKMGSLSSQADR----------V 289

  Fly   285 RQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTY 349
            ::|.:|||..||:..|..:|..:::|..|:..||.|:|.:|....:..||.||...::.|.::.|
 Frog   290 KRIAVEDLTTVKNHLVCSYPKDFEVFRVYLSAYHSGISDWLSTTAQRNLETNEIYFILDWNSNVY 354

  Fly   350 PGVELMSHPDLNVDVH-RQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWFTETVP 413
            .. :::|..:::..:: .::||||.||....||.:.:..:|....:.:.:...||::.|..|...
 Frog   355 YR-DVLSRSEISPLINPLELGTLLSPETRSMLEQQCVNAVQLRISQRLEEELRTEQEHWKEEHKI 418

  Fly   414 DQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFG---QTYLKNVIELKEH 475
            |..:..:...:    .|::..|::....|.:..   .:|||...:..|.   .::.|.|......
 Frog   419 DDIQSTFSMRS----IQIMKPHVERAPVISKGF---GIVMSQSCLRCFSDFLHSFQKAVDRFHAE 476

  Fly   476 HFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAASY 540
            .....:..:.:.:.||.|||......|.|.:|.|  :..|:.|  |...:...:..||.......
 Frog   477 QNGLNESSEAYIYRIIGIVNCCPPFREFANRMAQ--FESSQGE--EPLRQTEKSLDRIINLGTKT 537

  Fly   541 LLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRY 605
            :.:....|::.....|...:||:|:.|.:.:...|.|:......:....:::|::|..:.:....
 Frog   538 ICDLVLQDLKPFSRKLLGRRWLSSSDACEGMVAALTDHVPALRKINQGPYQVVVSELHRRVFLEL 602

  Fly   606 IRALLSKRL----SKPRAECDAITRKIKTEAKRFKLFFEKI-APKISLSDSPLDLISTLSALL-S 664
            :|.||..::    ||.|.:   ::.|:|.||::....|.|: :|:.||.    .||..|:.:| .
 Frog   603 VRPLLQGKMNCNTSKTRKK---VSNKLKDEARQLGQIFNKLESPQTSLD----HLIPRLAEILVL 660

  Fly   665 SDIELLVLDLHTLLGSYPSLNEDHLVRLFYIR 696
            .|...|.:::..|:..:|...:.|||.|..||
 Frog   661 EDTVSLQMEVGMLVSDFPDFRKHHLVALMDIR 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:283659 119/536 (22%)
exoc3l2XP_012824751.2 Sec6 204..729 CDD:418703 122/544 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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