DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and lgals4

DIOPT Version :9

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_005173755.1 Gene:lgals4 / 567193 ZFINID:ZDB-GENE-141222-13 Length:2601 Species:Danio rerio


Alignment Length:350 Identity:87/350 - (24%)
Similarity:127/350 - (36%) Gaps:81/350 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FAGNLSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIGLRFSCYFRNDVIVRNSRIN 69
            :.|.:...|..|..|.:.....|.|.:|.||..|.:|..|   ||...|.......|:: ||..|
Zfish  1465 YVGQVPGGLREGMALFMQGVVPDNADQFEINFKTGQSGSD---DIAFHFKPQMGQKVVM-NSFRN 1525

  Fly    70 GAWGEEESHVMDPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRD 134
            |||..||| |.|     ||...|:.|.:........:.:.:|.:|.|.|::|:||..:..|.|..
Zfish  1526 GAWETEES-VSD-----NPFTKGQHFKMLTAITSAGYQVYVNDKELCTFKHRLPLERLSTLNISG 1584

  Fly   135 QIQV--------------IKQVDHRTVFPN------PWPAVHASDYFKAFSNDQP---------- 169
            .:.:              :.|.  |:..|:      .|.:.|       ....||          
Zfish  1585 NVAINSLGSIQNWSTSSPVAQA--RSAIPSQGSSHGKWSSTH-------LEISQPVQHPKLTKAV 1640

  Fly   170 ----------ILFSPGHVIVLTARCFEN-KKGQFIIKFMDSDTKREELHFSVRFDEKAVVRNSMN 223
                      ||:..|.|.....|...| |.||    ..|.||   ..||:.|.| |.|..||: 
Zfish  1641 QIPGGLKEGMILYMKGAVPANADRFEINFKTGQ----SGDDDT---AFHFNPRLD-KNVAMNSV- 1696

  Fly   224 KNFEFGSEERHGGFPFVFNQQFKLALAFTEREVLTAVDGYNFFSYTWRTP---NAMMNLVGFKVT 285
            .|.:.|:||.....||...:.|::............|:|.....:..|||   .:.:|:.|  ..
Zfish  1697 INGQSGTEEIISDNPFKKGEPFEMLTMIKPEGYQVQVNGKEQCIFKHRTPLERVSALNISG--DV 1759

  Fly   286 SINGLVV-------QITGVDHLQTG 303
            ::|.|.:       .|..||.:..|
Zfish  1760 AVNNLEISQSIQNPNIPYVDQIPGG 1784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 5..140 CDD:278752 40/148 (27%)
GLECT 172..297 CDD:238025 35/135 (26%)
lgals4XP_005173755.1 Gal-bind_lectin 22..149 CDD:278752
GLECT 216..340 CDD:238025
Gal-bind_lectin 389..518 CDD:278752
Gal-bind_lectin 528..655 CDD:278752
Gal-bind_lectin 703..830 CDD:278752
Gal-bind_lectin 840..967 CDD:278752
Gal-bind_lectin 1013..1142 CDD:278752
Gal-bind_lectin 1152..1279 CDD:278752
Gal-bind_lectin 1325..1454 CDD:278752
Gal-bind_lectin 1464..1591 CDD:278752 40/135 (30%)
Gal-bind_lectin 1642..1766 CDD:278752 36/134 (27%)
Gal-bind_lectin 1776..1903 CDD:278752 2/8 (25%)
Gal-bind_lectin 1949..2073 CDD:278752
Gal-bind_lectin 2122..2246 CDD:278752
GLECT 2295..2422 CDD:238025
Gal-bind_lectin 2468..2593 CDD:278752
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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