DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and lgals4

DIOPT Version :10

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001011449.1 Gene:lgals4 / 496937 XenbaseID:XB-GENE-992854 Length:327 Species:Xenopus tropicalis


Alignment Length:112 Identity:39/112 - (34%)
Similarity:59/112 - (52%) Gaps:15/112 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DGAARFHINLCTAKSTVDPNADIGLRFSCYFRNDVIVRNSRINGAWGEEESHVMDPNTLPNPIVS 91
            :||.|||||.....|.     |:.|.|:.....:|:|||||:.|:||:||.     |...||...
 Frog   220 EGAERFHINFKAGSSN-----DVALHFNPRLTENVVVRNSRLGGSWGQEER-----NLSYNPFRP 274

  Fly    92 GEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQV 138
            |::|.:.|.|..|.|.:.:|.:.||.|.:|..:     .::.|:|:|
 Frog   275 GQYFDISIRCGMDRFTVFVNGQHFCDFAHRYSM-----FQMLDRIEV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 12..140 CDD:459768 39/112 (35%)
GLECT 172..297 CDD:238025
lgals4NP_001011449.1 GLECT 18..149 CDD:238025
Gal-bind_lectin 203..326 CDD:214904 39/112 (35%)
Blue background indicates that the domain is not in the aligned region.

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