DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and GRIFIN

DIOPT Version :9

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001381716.1 Gene:GRIFIN / 402635 HGNCID:4577 Length:144 Species:Homo sapiens


Alignment Length:143 Identity:35/143 - (24%)
Similarity:53/143 - (37%) Gaps:24/143 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AGNLSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIGLRFSCYFRNDVIVRNSRING 70
            ||.|:.    |..|.|......|..||..|...      ...||.......|.:..:|.|:...|
Human    10 AGGLAP----GWKLLVQGHADSGEDRFETNFLL------ETGDIAFHIKPRFSSATVVGNAFQYG 64

  Fly    71 AWGEEE-SHVMDPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRM-PLG-TIRALEI 132
            .||.|: |.:.       |:..||.|.:.:....:.|.:.....:..:|..|. ||| |.|...:
Human    65 RWGPEQVSSIF-------PLAPGEPFEIEVSWDAEHFHVYAPEHKVLQFPCRQRPLGATTRVRVL 122

  Fly   133 RD----QIQVIKQ 141
            .|    |:::.|:
Human   123 SDHCLAQVELAKR 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 5..140 CDD:278752 34/140 (24%)
GLECT 172..297 CDD:238025
GRIFINNP_001381716.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.020

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