DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and Lgals4

DIOPT Version :10

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_063137920.1 Gene:Lgals4 / 25474 RGDID:3003 Length:349 Species:Rattus norvegicus


Alignment Length:259 Identity:67/259 - (25%)
Similarity:108/259 - (41%) Gaps:42/259 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LEVVAKTIDGAARFHINLCTAKSTVDPNADIGLRFSCYFRN-DVIVRNSRINGAWGEEESHVMDP 82
            ::.:||  |...|||:|....:   |..|||...|:..|.. |.:|.|:..:|.||:||      
  Rat    35 IQGIAK--DNMRRFHVNFAVGQ---DEGADIAFHFNPRFDGWDKVVFNTMQSGQWGKEE------ 88

  Fly    83 NTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQVIKQVDH--- 144
            .....|...|..|.:..:...:.:.:.:|...|..:.:|:||..:..|::...:: ::.::.   
  Rat    89 KKKSMPFQKGHHFELVFMVMSEHYKVVVNGTPFYEYGHRLPLQMVTHLQVDGDLE-LQSINFLGG 152

  Fly   145 ---RTVFPNPW--PAVHASDYFKAFSNDQPI-----LFSPGHVIV------LTARCFENKKG--- 190
               .:.:|...  ||..::.|.....|..|:     :|:|....|      ||||.....||   
  Rat   153 QPAASQYPGTMTIPAYPSAGYNPPQMNSLPVMAGPPIFNPPVPYVGTLQGGLTARRTIIIKGYVL 217

  Fly   191 ----QFIIKFMDSDTKREELHFSVRFDEKAVVRNSMNKNFEFGSEERHGGF-PFVFNQQFKLAL 249
                ..||.|....|.....|.:.|..: .|||||. .|..:|||||...: ||...|.|.::|
  Rat   218 PTAKNLIINFKVGSTGDIAFHMNPRIGD-CVVRNSY-MNGSWGSEERKIPYNPFGAGQFFDVSL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 12..140 CDD:459768 30/121 (25%)
GLECT 172..297 CDD:238025 31/92 (34%)
Lgals4XP_063137920.1 None

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