DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5335 and F38A1.11

DIOPT Version :10

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_741306.2 Gene:F38A1.11 / 185441 WormBaseID:WBGene00009524 Length:299 Species:Caenorhabditis elegans


Alignment Length:318 Identity:54/318 - (16%)
Similarity:111/318 - (34%) Gaps:87/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VVAKTIDGAARFHINLCTAKSTVDPNAD--IGLRFS-----CYFRNDVIVRNSRINGAWGEEESH 78
            :::|...|...::|....:...|:.|:.  :.|:..     |....|..:        :|...:.
 Worm    34 LISKLTSGCEYYYIGDTVSVDKVEKNSQKRVALKLPVTQGLCSISTDAPL--------FGSPSAS 90

  Fly    79 VMDPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRAL-EIRDQIQVIKQV 142
            |:..|       ..||:...::         .::..||.|:|    |....| ::.::.:.::  
 Worm    91 VVATN-------GTEFYYQTMV---------TDNGTFCSFQY----GLWTCLKDVPEEYESLE-- 133

  Fly   143 DHRTVFPNPWPAVHASDYFKAFSNDQPILFSPGHVIVLTARCFENKKGQFIIKFMDSDTKREELH 207
                       .:::|.|..:. |..|  ||||....:..| ...::..|.|.|::..|:...::
 Worm   134 -----------GMNSSGYRHSL-NGAP--FSPGETFFMKGR-ISAEEDLFSISFLEDSTQNYPVY 183

  Fly   208 FSVRFDEKAVVRNSMNKNF---EFGSEERHGGFPFVFNQ--------QFKLALAFTEREVLTAVD 261
            ..        :.|...:||   |..:.:......::.||        :|.:.:..:|.:....:|
 Worm   184 IK--------LNNKRTENFVTTEIATWKDSDIIYWIDNQTNPYSIGDEFTIYVNSSETQAFIYLD 240

  Fly   262 GYNFFSYTWRTPNAMMNLVGFKVTSINGLVVQITGVDHLQ-----TGDPTCAGFEKYS 314
            ..... |..:.        ||.::.....|:.|:|...:.     |||.....| |||
 Worm   241 NTKIV-YDLQD--------GFPLSPTTAFVINISGGTVIMYFVGWTGDCWVWKF-KYS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 12..140 CDD:459768 19/126 (15%)
GLECT 172..297 CDD:238025 23/135 (17%)
F38A1.11NP_741306.2 PAN_3 1..67 CDD:429894 5/32 (16%)

Return to query results.
Submit another query.