DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5335 and lec-3

DIOPT Version :10

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001263668.1 Gene:lec-3 / 174557 WormBaseID:WBGene00002266 Length:337 Species:Caenorhabditis elegans


Alignment Length:309 Identity:95/309 - (30%)
Similarity:136/309 - (44%) Gaps:48/309 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FAGNLSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIGLRFSCYFRNDVIVRNSRIN 69
            :...|:..:|.|..|.:..||||.:.||:|||.........| |:.|..|..|....||.|:...
 Worm    51 YRSKLTERIEPGQTLIIRGKTIDESKRFNINLHKDSPDFSGN-DVPLHLSIRFDEGKIVYNAYTK 114

  Fly    70 GAWGEEESHVMDPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRD 134
            |.||:||       ...|||..|:.|.:.|...:..|.:|||.:|...|.:|:||.::..|.|..
 Worm   115 GTWGKEE-------RAKNPIKKGDDFDIRIRAHDSKFQVSINHKEVKNFEHRIPLNSVSHLSIDG 172

  Fly   135 QIQVIKQVD-HRTVFPNPWPAVHASDYFKAFSNDQPILFSPGHVIVLTARCFENKKGQFIIKFM- 197
            .: |:..|. ....:|.|:.:..|:|.           ..||..:|:.... |.|..:|.|..: 
 Worm   173 DV-VLNHVQWGGKYYPVPYESGIAADG-----------LVPGKTLVVYGTP-EKKAKKFNINLLK 224

  Fly   198 -DSDTKREELHFSVRFDEKA------------VVRNSMNKNFEFGSEERHGGFPFVFNQQFKLAL 249
             :.|.   .|||:.||||||            |||||: .|.|:|:|||.|..||.....|.|.:
 Worm   225 KNGDI---ALHFNPRFDEKANGFMCAKPTPGSVVRNSL-VNGEWGNEEREGKNPFERLTAFDLEI 285

  Fly   250 AFTEREVLTAVDGYNFFSYTWRT-PNAMMNLVGFKVTSINGLVVQITGV 297
            ...|......|:|..|.||..|. |:.:..|      .|.| .:::||:
 Worm   286 RNEEFAFQIFVNGERFASYAHRVDPHDIAGL------QIQG-DIELTGI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 12..140 CDD:459768 43/127 (34%)
GLECT 172..297 CDD:238025 45/139 (32%)
lec-3NP_001263668.1 GLECT 50..180 CDD:238025 44/137 (32%)
GLECT 198..328 CDD:238025 46/153 (30%)

Return to query results.
Submit another query.