DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and lgals4.2

DIOPT Version :9

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_002939301.2 Gene:lgals4.2 / 100496749 XenbaseID:XB-GENE-5891875 Length:319 Species:Xenopus tropicalis


Alignment Length:299 Identity:71/299 - (23%)
Similarity:119/299 - (39%) Gaps:47/299 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LEVVAKTIDGAA--RFHINLCTAKSTVDPNADIGLRFS-CYFRNDVIVRNSRINGAWGEEESHVM 80
            :.||.:.:..::  ||.||..|.:.   ..:|:....: .|...|.:|.||...|.|.:||....
 Frog    31 MAVVIQAVPPSSCNRFAINFSTGQY---DGSDVAFHINPRYDGRDRVVFNSLQGGTWEKEEMKRE 92

  Fly    81 DPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQV------- 138
            .|..|      |:.||:......:::.:::|...|..|.:|:||..:..:::..:|.|       
 Frog    93 MPFKL------GKVFLLIFEITPNNYQVTVNGSPFYEFAHRIPLERVSWIQVTGEITVQALCIIG 151

  Fly   139 --------------IKQVDHRTVFP---NPWPAVHASDYFKAFSNDQPILFSPGHVIVLTARCFE 186
                          :.....:...|   .| |.:|....|||......|   |...:|:......
 Frog   152 NGPASGAGGTKGAGLLMSSSQEFLPPMLGP-PNLHPITPFKANIRGGMI---PKRTVVIKGIVNS 212

  Fly   187 NKKGQFIIKFMDSDTKREELHFSVRFDEKAVVRNSMNKNFEFGSEERH-GGFPFVFNQQFKLALA 250
            |.| .|.|.|....|....||.:.|.::..:||||. .|..:|.||:. ...||...:.|.:::.
 Frog   213 NAK-TFQISFKVGYTNDIALHINPRLNKNTLVRNSF-INGTWGEEEKDVVKNPFHQGEYFDISVR 275

  Fly   251 FTEREVLTAVDGYNFFSYTWRTPNAMMNLVGFKVTSING 289
            ..|::....|:||:.|:|..|    :.||.......|:|
 Frog   276 SGEKQFKVYVNGYHCFNYVHR----LTNLQQIDTMEIDG 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 5..140 CDD:278752 30/144 (21%)
GLECT 172..297 CDD:238025 33/119 (28%)
lgals4.2XP_002939301.2 GLECT 18..144 CDD:238025 29/121 (24%)
Gal-bind_lectin 196..318 CDD:214904 34/124 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9354
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 1 1.000 - - FOG0000178
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X133
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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