DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5335 and lgals9c

DIOPT Version :9

Sequence 1:NP_611349.2 Gene:CG5335 / 37140 FlyBaseID:FBgn0034365 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_012811742.1 Gene:lgals9c / 100124899 XenbaseID:XB-GENE-988896 Length:316 Species:Xenopus tropicalis


Alignment Length:327 Identity:81/327 - (24%)
Similarity:128/327 - (39%) Gaps:62/327 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIGLRFSCYF-RNDVIVRNSRINGAW 72
            |||.|..|.::.:.........||:||.....|:   |.|:...|:..| ...::|.|::...:|
 Frog    17 LSHGLHDGFLVVISGVVCPSGDRFNINFQCGHSS---NDDVAFHFNPRFIDGGIVVCNTKERNSW 78

  Fly    73 GEEESHVMDPNTLPNPIVSGEFFLVYILCCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQ 137
            |.||      |....|....:.|.:.||....|:.:|:|...|..:.:|:|:..:..|.|...:.
 Frog    79 GREE------NKREMPFHRHQPFEIRILVSNHSYNVSVNRNHFVEYHHRIPIQRVNTLTIGGCVN 137

  Fly   138 V----IKQ------VDHRTVFPN-PWPAVHASDYFKAFSNDQPILFSPGHVI--VLTARCFENK- 188
            :    ::|      ..|   ||. |..:.|...|.       |..|.||...  .:.|..::.| 
 Frog   138 LTCVH
VQQQGGGFPPQH---FPGAPTFSPHQPGYL-------PQQFPPGGAFNPQVYAIPYQTKI 192

  Fly   189 -KGQFIIKF------MDSDTKR----------EELHFSVRFDEKAVVRNSMNKNFEFGSEERH-- 234
             .|.|..|.      :.:..||          ..|||:.||||..:|||| :.|..:|.|||:  
 Frog   193 HGGFFPSKMIAVRGTVPAHPKRFHLNLKFHGGTALHFNPRFDEHTIVRNS-HLNGSWGKEERNLP 256

  Fly   235 GGFPFVFNQQFKLALAFTEREVLTAVDGYNFFSYTWRTPNAMMNLVGFKVTSINGLVVQITGVDH 299
            .|..|...|.|.:.:...:......|:|.:...:..|    :.:|.......|.|.||    :.|
 Frog   257 SGMVFSPGQSFVIEIRCEQHAFKVHVNGAHICDFNHR----VHSLQQIDTLQIEGDVV----LQH 313

  Fly   300 LQ 301
            :|
 Frog   314 VQ 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5335NP_611349.2 Gal-bind_lectin 5..140 CDD:278752 33/135 (24%)
GLECT 172..297 CDD:238025 38/146 (26%)
lgals9cXP_012811742.1 Gal-bind_lectin 12..142 CDD:366037 33/133 (25%)
GLECT 187..315 CDD:238025 35/136 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357844at33208
OrthoFinder 1 1.000 - - FOG0000178
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4988
SonicParanoid 1 1.000 - - X133
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

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