DRSC/TRiP Functional Genomics Resources

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Protein Alignment JAG2 and arg-1

DIOPT Version :10

Sequence 1:NP_002217.3 Gene:JAG2 / 3714 HGNCID:6189 Length:1238 Species:Homo sapiens
Sequence 2:NP_001024615.1 Gene:arg-1 / 180501 WormBaseID:WBGene00000185 Length:357 Species:Caenorhabditis elegans


Alignment Length:310 Identity:68/310 - (21%)
Similarity:107/310 - (34%) Gaps:104/310 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   154 DTTPNEELLIERVSHAGMINPED-RWK---------SLHFSGHVAHLELQIRVRCDENYYSATCN 208
            :.:.||.|.:|:  |..   |.| :|.         :|.|     ::.:.:|..|..|||...||
 Worm    87 EPSTNEMLALEQ--HRA---PSDTKWNTGLPIVIETTLGF-----NVTVHLRNVCTSNYYGKRCN 141

Human   209 KFCRPRNDFFGHYTCDQYGNKACMDGWMGKECKEAVCKQGCNLLHGGCTVPGECRCSYGWQGRFC 273
            ::|.|                                   ...||..|:..|..:|:.||.|   
 Worm   142 RYCIP-----------------------------------SPALHWECSTNGVRQCAVGWYG--- 168

Human   274 DECVPYPGCVHGSCVEPWQCNCETNWGGLLCDKDLNYCGSHHPCTNGGTCINAEPDQYRCTCPDG 338
            |:                            |..::.:|...:||.|||.|    ...|:|.||..
 Worm   169 DD----------------------------CSSNIKFCSHQNPCANGGVC----STDYKCQCPSE 201

Human   339 YSGRNCE---KAEHACTSNPCANGGSCHEV-PSGFECHCPSGWSGPTCALDI-DECASNPCAAGG 398
            :.|..||   ...|......|.:||:|..| .:..:|.|..|:.|..|.:.| ..|::..|:...
 Worm   202 FLGPRCETPVSKVHCTLERVCKHGGTCVSVNRTNVQCKCIRGFLGSLCEIGIHGNCSAMRCSVDE 266

Human   399 TCVDQVDGFECICPEQWVGATCQLDANECEGK-PCLNAFSCKNLIGGYYC 447
            ||  |:.....:|.::      :..|....|. |....|:...:||.:.|
 Worm   267 TC--QIRASFAVCAKK------EKSAETVTGTGPDALHFAMLAVIGVFVC 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JAG2NP_002217.3 MNNL 28..196 CDD:462222 10/51 (20%)
DSL 178..240 CDD:128366 12/70 (17%)
EGF_CA 307..345 CDD:238011 12/37 (32%)
EGF 351..381 CDD:394967 9/30 (30%)
EGF_CA 385..421 CDD:238011 7/36 (19%)
EGF_CA 423..458 CDD:238011 7/26 (27%)
EGF_CA 461..496 CDD:238011
EGF_CA 500..534 CDD:238011
EGF_CA 536..571 CDD:238011
EGF_CA 636..671 CDD:238011
EGF_CA 676..709 CDD:238011
EGF 716..746 CDD:394967
EGF_CA 757..787 CDD:238011
EGF_CA 789..824 CDD:238011
EGF_CA 827..863 CDD:238011
VWC_out 872..943 CDD:214565
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1114..1139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1238
arg-1NP_001024615.1 DSL 107..171 CDD:128366 21/134 (16%)
EGF_CA 174..208 CDD:238011 12/37 (32%)
Blue background indicates that the domain is not in the aligned region.

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