DRSC/TRiP Functional Genomics Resources

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Protein Alignment JAG2 and apx-1

DIOPT Version :10

Sequence 1:NP_002217.3 Gene:JAG2 / 3714 HGNCID:6189 Length:1238 Species:Homo sapiens
Sequence 2:NP_503882.2 Gene:apx-1 / 178759 WormBaseID:WBGene00000168 Length:515 Species:Caenorhabditis elegans


Alignment Length:278 Identity:87/278 - (31%)
Similarity:133/278 - (47%) Gaps:32/278 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   154 DTTPNEELLIERVSHAGMINPEDRWKS----LHFSGHVAHLELQIRVRCDENYYSATCNKFCRPR 214
            :.|.||.|.::....|.    :..|.|    :..:....::.:|:|..|..||:...||::|...
 Worm    88 EPTSNEILALQHHRPAA----DTEWNSDAPIVIETSRGFNVTVQLRNLCSSNYHGKRCNRYCIAN 148

Human   215 NDFFGHYTCDQYGNKACMDGWMGKECKEAVCKQGCNLLHGGCTVPGECRCSYGWQGRFCDECVPY 279
            ...  |:.|..:|.:.|..||.|::|...:|..||: ..|.|..|.:|.|:.|:.|..|::|:|.
 Worm   149 AKL--HWECSTHGVRRCSAGWSGEDCSNPICAGGCS-NRGRCVAPNQCSCADGFNGTRCEQCLPR 210

Human   280 PGCVHGSCVE--PWQCNCETNWGGLLCDKDLNYCGSHHPCTNGGTCI--NAEPDQYRCTCPDGYS 340
            .|||:|.||.  |..|.|...:.|..||.|:..|....||.|||.|.  ::....|:|.||..:.
 Worm   211 AGCVNGDCVNETPNTCKCRDGFIGDRCDIDIKICSLEKPCANGGICSIDSSSSTGYKCHCPFEFV 275

Human   341 GRNCE--------KAEHACTSNPCANGGSCHEV-PSGFECHCPSGWSGPTCAL-DIDECASNPCA 395
            |..|:        .|||.     |.|||:|..: .:..:|.|..|:||..|.: :..:|::..|:
 Worm   276 GSQCKTPLSKVRCSAEHV-----CKNGGACISMDDTNIQCKCRRGFSGKFCEIGNHGDCSAMRCS 335

Human   396 AGGTCVDQVDGFECICPE 413
            ||.||  |:.|...||.|
 Worm   336 AGETC--QISGDFAICVE 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JAG2NP_002217.3 MNNL 28..196 CDD:462222 8/45 (18%)
DSL 178..240 CDD:128366 17/65 (26%)
EGF_CA 307..345 CDD:238011 13/39 (33%)
EGF 351..381 CDD:394967 10/30 (33%)
EGF_CA 385..421 CDD:238011 11/29 (38%)
EGF_CA 423..458 CDD:238011
EGF_CA 461..496 CDD:238011
EGF_CA 500..534 CDD:238011
EGF_CA 536..571 CDD:238011
EGF_CA 636..671 CDD:238011
EGF_CA 676..709 CDD:238011
EGF 716..746 CDD:394967
EGF_CA 757..787 CDD:238011
EGF_CA 789..824 CDD:238011
EGF_CA 827..863 CDD:238011
VWC_out 872..943 CDD:214565
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1114..1139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1238
apx-1NP_503882.2 DSL 108..172 CDD:473190 17/65 (26%)
Blue background indicates that the domain is not in the aligned region.

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