DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5493 and cdo1

DIOPT Version :10

Sequence 1:NP_611348.1 Gene:CG5493 / 37139 FlyBaseID:FBgn0034364 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_989132.1 Gene:cdo1 / 394737 XenbaseID:XB-GENE-998513 Length:201 Species:Xenopus tropicalis


Alignment Length:195 Identity:108/195 - (55%)
Similarity:140/195 - (71%) Gaps:15/195 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NSLSDLVAALHREFESNYVNIEMVNHLMLSYKSNPREWRKYAKFDRYTYTRNLVDAGNGKFNLLI 104
            |:|.:|:..||..|.|:.||||.|..::.||:||||||.|:||||:|.|||||||.|||||||:|
 Frog    10 NTLDELIQILHEIFASDKVNIEEVQAIVESYESNPREWMKFAKFDQYRYTRNLVDEGNGKFNLMI 74

  Fly   105 LCWGEGHGSSVHDHADSHCFMKMLKGDLREKRYEYPNRSARDNGRSHHPDGEIDSRELVEIGETP 169
            ||||||||||:||||:||||:|:|:|.|:|..||:|.:.:              :.|:|:..|..
 Frog    75 LCWGEGHGSSIHDHANSHCFLKILQGSLKETLYEWPKKKS--------------NTEMVKKAEGV 125

  Fly   170 IAVNDVAYINDNLGLHRVENPSHSDTSVSLHLYCPPFDTCSVFQDNLKKT-TAKVTFWSKYGVRT 233
            :.:|..|||||::||||||||||::.:||||||.|||:.|..|......| :.|:|||||||.||
 Frog   126 LKLNQCAYINDSIGLHRVENPSHTEPAVSLHLYSPPFNECHTFDQRTGHTNSVKMTFWSKYGDRT 190

  Fly   234  233
             Frog   191  190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5493NP_611348.1 cupin_RmlC-like 41..212 CDD:477354 95/170 (56%)
cdo1NP_989132.1 CDO_I 2..171 CDD:428713 97/174 (56%)

Return to query results.
Submit another query.