DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5493 and Cdo1

DIOPT Version :10

Sequence 1:NP_611348.1 Gene:CG5493 / 37139 FlyBaseID:FBgn0034364 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_149026.1 Gene:Cdo1 / 12583 MGIID:105925 Length:200 Species:Mus musculus


Alignment Length:194 Identity:101/194 - (52%)
Similarity:135/194 - (69%) Gaps:16/194 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SLSDLVAALHREFESNYVNIEMVNHLMLSYKSNPREWRKYAKFDRYTYTRNLVDAGNGKFNLLIL 105
            :|:||:..||..|..:.||:|.|..::.:|:|||.||..|||||:|.|||||||.|||||||:||
Mouse    11 TLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMIL 75

  Fly   106 CWGEGHGSSVHDHADSHCFMKMLKGDLREKRYEYPNRSARDNGRSHHPDGEIDSRELVEIGETPI 170
            |||||||||:|||.|||||:|:|:|:|:|..:::|::.               |.|:::..|..:
Mouse    76 CWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKK---------------SNEMIKKSERTL 125

  Fly   171 AVNDVAYINDNLGLHRVENPSHSDTSVSLHLYCPPFDTCSVF-QDNLKKTTAKVTFWSKYGVRT 233
            ..|..|||||::|||||||.||::.:||||||.||||||..| |....|....:||.||:|:||
Mouse   126 RENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIRT 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5493NP_611348.1 cupin_RmlC-like 41..212 CDD:477354 91/170 (54%)
Cdo1NP_149026.1 CDO_I 2..170 CDD:428713 92/173 (53%)

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