DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS28 and Mrps28

DIOPT Version :10

Sequence 1:NP_523785.2 Gene:mRpS28 / 37136 FlyBaseID:FBgn0034361 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_079710.3 Gene:Mrps28 / 66230 MGIID:1913480 Length:186 Species:Mus musculus


Alignment Length:180 Identity:78/180 - (43%)
Similarity:104/180 - (57%) Gaps:28/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 MASLTCRSRMPMVIRLISGNT----------EKPAEESTPAVNTETAEIGSS-----KGGFARAF 63
            ||:| |||.        :|..          .||...::....:|:|...||     .||||.|.
Mouse     1 MAAL-CRSH--------AGTAGSRFLRALVFSKPLRNASTESGSESATHDSSAPRARSGGFASAL 56

  Fly    64 DKYTAPATPPQL----PEDNQTFASLLRNSKLIDLDNAEGKVVSGKIFHVVGDDLYIDFGWKFHC 124
            ::::......:|    |:..::|||:||:|.|..|..|:.|:|.|:|||:|.||||||||.||||
Mouse    57 ERHSDLQRKAELRLESPKPVESFASMLRHSPLTQLGPAKDKLVIGRIFHIVEDDLYIDFGGKFHC 121

  Fly   125 VCSRPTRNASDYVRGARVRLRIKDLELSTKFLGSSKDITILEADCHLLGL 174
            ||.||..:...|.||.|||||:.||||:::|||.:.|.||||||..||||
Mouse   122 VCKRPDVDGEKYQRGTRVRLRLLDLELTSRFLGGTTDTTILEADAVLLGL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS28NP_523785.2 MRP-S35 76..180 CDD:402037 59/99 (60%)
Mrps28NP_079710.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..50 4/20 (20%)
MRP-S35 73..177 CDD:402037 59/99 (60%)

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