DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and arhgef7a

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_021334338.1 Gene:arhgef7a / 553493 ZFINID:ZDB-GENE-060322-11 Length:864 Species:Danio rerio


Alignment Length:953 Identity:181/953 - (18%)
Similarity:345/953 - (36%) Gaps:241/953 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 PGTPATPTPSATKAKEFVCSEPLSPVDIVDTINFDLVAQHMERLTLADPGDLDPRAELIEAVNKT 395
            |||           .:.:..:|.:..:.:..|...|....:.|:...:.||| .:...|..|..|
Zfish    50 PGT-----------TDKIIQDPKNDSECLSNITEFLKGCAVFRVEPFEAGDL-LQGHNISRVLTT 102

  Fly   396 LVNKPLVRSSSAACASTICSSPLLTYARTKSLGAKASTLGGGVPIKLPTAEQLAELEEANKLSAE 460
            ||....|.:.....:.::|:.....: |.||..:.||....|...|| ...|...|         
Zfish   103 LVALNKVTADIGIGSDSVCTRHSSAH-RIKSFESLASQSSLGRSSKL-LHNQFRSL--------- 156

  Fly   461 SLDRLTDIKPKFAARLSELARLN-------NRPLSSSSICSTSSSSSSG-SDQLLNGKLMATSYL 517
             :..:.|:.....|:|...||.|       ....|...:.|.:.:...| .:.:||||   |.:.
Zfish   157 -VSNIGDMTDNSNAQLVVKARFNFQQTNEDELTFSKGDLISVTRTEEGGWWEGILNGK---TGWF 217

  Fly   518 AS--VESLAESENEL----GDQHHPPA---MSVLEKTCLEIV-----DSERSFVEDLGQVIKGYL 568
            .|  |:.:..|:.::    |:...||.   .:.:.||...:|     ::|..:..:|..::..||
Zfish   218 PSNYVKEVKGSDKQVSPKSGNLKSPPKGFDTASISKTYYNLVLQNILETETEYSRELQNLLTSYL 282

  Fly   569 QDWKERACLRVDELQILFANIEEIYEFNSMLLQRLINTGRDP---GRIARCFIDLRDGF-DVYTT 629
            :..:....|...::.::..|:|||..|...|:|.|.:..:.|   .::...|::|.... .:..:
Zfish   283 RPLQMTERLSPADVSVILGNLEEISTFQQTLVQSLEDLTKLPELQQKVGGFFLNLMPQMRSLNVS 347

  Fly   630 YCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHR-------LPLGSYLLKPVQRILKYHLLLDS 687
            ||:::|..:::||     .|:..|    .:.::.|       |.|.|.|.||..|:.:|..||..
Zfish   348 YCSNHPSTVNVLT-----VHSEEL----GEFMEARGASVPGILTLTSGLSKPFMRLDRYPTLLKE 403

  Fly   688 LRKHC-----DVKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLGPELTVLGELRQ 747
            |.:|.     |..|:.:.....:.::....:|::::|.:.::  |:..:..|.|.::..||.:..
Zfish   404 LERHMEEGHPDRTEIQKCMTAFKNLSAQCQEVRKRKELELQI--LAETIRLWEGEDIKTLGSVLY 466

  Fly   748 EGLLMEQHN-----KQRLVLLFATMLIITKQKEDGRLQFKTYISQNNLMLSEHLPGEPTSFYVIP 807
            ....|.|::     .:|.:|||..:|:|.....    :...:|.|..|.||        ...|.|
Zfish   467 MSQAMVQNHGCEEKNERYLLLFPHVLLILSASP----RMSGFIYQGKLPLS--------GMTVTP 519

  Fly   808 FDEPR-------------HQIKLTARNRDQKRIWTQHIK---------GVMLEKLDIPMRAKELV 850
            .::..             .::::...|:.....|.:|:.         ...::.|.:|.....  
Zfish   520 LEDCESHKDAFELSGSMFERLQVICYNKQDLHDWLEHLNRQTKHTTMAAPSMKPLTVPCHTLP-- 582

  Fly   851 YQLGNEEDRTPDRSTWKWSLHS---GSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDS 912
                 ....||.|       |.   |....|.|                     .|:.:.||..:
Zfish   583 -----SHPLTPSR-------HGESRGLTVAPAY---------------------HTLPHPSSHGT 614

  Fly   913 FNESL---------EQEEESISQAKPSKPLARNNSLDDTALQKLAAAMRYRKRDAAVKEETKTPV 968
            .:.::         .|:..|:|..:|:.||            :.:||:.|:      ::.:|:| 
Zfish   615 PHSTMMWGPLEPPKTQKPWSLSCLRPAPPL------------RPSAALCYK------EDLSKSP- 660

  Fly   969 KEPCKCDQDAKQDERIEPCSCILRDQRSRSAKSQSPVFSYK----ALKERSKSVPRIGGFSLDEE 1029
                      |..:::.|       :|....|.....|:.:    ||:|.::.:..|..:....:
Zfish   661 ----------KTMKKLLP-------KRKPERKPSDEEFALRKSTVALEEDAQILKVIEAYCTSAK 708

  Fly  1030 AEREREQ-------------DEDSAASLRGSKPDLSERKTKGKGFFEVKQYNHKTMPKKIANLKK 1081
            ..:....             |:.||.|| |.:..:| |........|...|:         ::..
Zfish   709 TRQTLNSTWQGTDLMHNHVLDQSSADSL-GRRSSIS-RPEATSDLSEDSDYD---------SIWT 762

  Fly  1082 QRSSTTKSCSRFYMDLSEFDSSSSTVLKITE--STEELRPDGEIELAQEAATLDESTQDQYYSPD 1144
            ..|....|.:|.:.     |.|.:.::...|  |.:||:.:|: .|.:|.:.:|.    .|...|
Zfish   763 AHSYRMGSVTRQWK-----DGSPALIVPGDEKFSVDELKSNGQ-TLLEEKSLVDV----VYALRD 817

  Fly  1145 HETELLSPAEKSKRDAQIVLDLLKNSKEFERIYNKQQKRRESP 1187
            ...||....:|.|:..:   :..:..|:.|||..|..|....|
Zfish   818 EVQELKQDYKKMKKSLE---EEQRARKDLERIVKKMLKNMNDP 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 39/184 (21%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 26/171 (15%)
arhgef7aXP_021334338.1 CH_SF 4..114 CDD:469584 16/75 (21%)
RhoGEF67_u1 116..168 CDD:465201 12/63 (19%)
SH3_alphaPIX 170..226 CDD:212993 14/58 (24%)
RhoGEF 256..433 CDD:238091 39/185 (21%)
PH_Cool_Pix 464..562 CDD:269932 18/109 (17%)
RhoGEF67_u2 621..711 CDD:465200 20/125 (16%)
betaPIX_CC 779..863 CDD:465158 22/87 (25%)

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