DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and ARHGEF4

DIOPT Version :9

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001354422.1 Gene:ARHGEF4 / 50649 HGNCID:684 Length:1876 Species:Homo sapiens


Alignment Length:997 Identity:220/997 - (22%)
Similarity:357/997 - (35%) Gaps:253/997 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESDSDTSERWEDFFG--SSTELAPSLLGIYDTLTNSFAAGGVAAAPTATS-----HESKASSSGD 61
            |:||...||.||..|  .|...||.|                |:.|.::|     |..|:..:..
Human   983 ETDSHCEERAEDKEGYVFSDHWAPPL----------------ASTPLSSSLVSPEHRRKSEPTIK 1031

  Fly    62 STPKRSN-----SNCSSSSSTGSSTGSCSSVPTSDDQSASYTLASSST-HLGHQEPPAPLVVAG- 119
            .|..:..     |......|..:|.||    |.:.....::||.|||. .|.::.|..|..... 
Human  1032 CTATQEGGRYLPSGIFPEKSWLASPGS----PRAQQAGIAHTLPSSSACCLAYENPGTPCRPTSP 1092

  Fly   120 --LRDEPDGAQLSRLVQRRSQESQIHGSSSSIASSGS-----SRRGSNIRILSPNVHRIITHSDI 177
              |...|.       .||........||:.|:.|.||     |..|...|...|..         
Human  1093 KPLSPRPS-------AQRMGLHYPGRGSAISMVSLGSYSYVDSSSGDPERPKIPKG--------- 1141

  Fly   178 QPVEAVSAEALKQHQQQSQ-RSPTQGRYIKTGHSGTPPAAGSAPKLK-----LSHIPLSKITGKL 236
            |....:|.:.|.|.:|:.: |...||          |...|:.|.|:     .:|:|..:..|:.
Human  1142 QTSFLLSLQTLNQDEQKEESREGGQG----------PRGLGTVPWLRDLPGSENHMPWEEPAGEK 1196

  Fly   237 STQSGSELVSTFDSSNE---YLNSVAFAAFEKSKPQDEDRTPTN-KSVP-GTPFHFDG---HPFQ 293
            .:.|.|:.....:.:.:   ..:.|.:|....|........|:. :.:| .:|...|.   ...|
Human  1197 PSCSHSQKAFHMEPAQKPCFTTDMVTWALLCISAETVRGEAPSQPRGIPHRSPVSVDDLWLEKTQ 1261

  Fly   294 GRKLTLPRY-----------------------DSQQSIKLIE----MEQLAATSAQLLHAKPATP 331
            .:||....:                       .|.:|:.|..    :.|.|.|....:.....||
Human  1262 RKKLQKQAHVERRLHIGAVHKDGVKCWRKTIITSPESLNLPRRSHPLSQSAPTGLNHMGWPEHTP 1326

  Fly   332 GTPATPTPSATKAKEFVCSEPL-SPVDIVDTINFDLVAQHMERLTLADPGDLDPRAELIEAVNKT 395
            || |.|..:...|   ||::.: |..|:.|.:       |......:.||....:.    |:|: 
Human  1327 GT-AMPDGALDTA---VCADEVGSEEDLYDDL-------HSSSHHYSHPGGGGEQL----AINE- 1375

  Fly   396 LVNKPLVRSSSAACASTICSSPLLTYARTKSLGAKASTLGGGVPIKLPTAEQLAELEEANKLSAE 460
                 |:...|..||..:.....:.   .:.||.||..:                :|..:..:.|
Human  1376 -----LISDGSVVCAEALWDHVTMD---DQELGFKAGDV----------------IEVMDATNRE 1416

  Fly   461 -SLDRLTDIKPKFAARLSELARLNNRPLSSSSICSTSSSSSSGSDQLLNGKLMATSYLASVESLA 524
             ...|:.|.:..|.|....|....:.|....:..:.:|.:..|..:..:.|              
Human  1417 WWWGRVADGEGWFPASFVRLRVNQDEPADDDAPLAGNSGAEDGGAEAQSSK-------------- 1467

  Fly   525 ESENELGDQHHPPAMSVLEKTCLEIVDSERSFVEDLGQVIKGYLQDWKERACLRVDE-LQILFAN 588
                   ||.....::       ||:.:||.:::.|..:.:||::..::||.:..:| |:.:|.|
Human  1468 -------DQMRTNVIN-------EILSTERDYIKHLRDICEGYVRQCRKRADMFSEEQLRTIFGN 1518

  Fly   589 IEEIYE----FNSMLLQRLINTGRDPGRIARCFIDLRDGFDVYTTYCTSYPEA---ISLLTKLLQ 646
            ||:||.    |...|.||..........:..||::.:..|.:|:.||.::|.|   :|.||||.:
Human  1519 IEDIYRCQKAFVKALEQRFNRERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSK 1583

  Fly   647 ATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRK-----HCDVKEVVEAHVIMRQ 706
            ..:.:......||::.  :.|..:||.|||:|.||.|.|..|.|     |.|.|:|..|...|:.
Human  1584 YVYFFEACRLLQKMID--ISLDGFLLTPVQKICKYPLQLAELLKYTHPQHRDFKDVEAALHAMKN 1646

  Fly   707 VAHNIDQVKRKQEQQSRVKELSGILDGWLGPELTV-LGELRQEGLLM-----EQHNKQRLVLLFA 765
            ||..|::.||:.|...::.:....::.|.|.:|.| ..||...|.|.     :..::||:..||.
Human  1647 VAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFD 1711

  Fly   766 TMLIITKQKEDGR--LQFKTYISQNNLMLSEHLPGEPTSFYVIPFDEPRHQIK------------ 816
            ..||..|:....|  |.:|..:..:.|.:.:...|:....:|        .||            
Human  1712 HQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHV--------SIKNAFRLHRGATGD 1768

  Fly   817 ---LTARNRDQKRIWTQHIKGVMLEKLDIPMRAKELVYQLGNEEDRTPDRSTWKWSLHSGSNSTP 878
               |..|..:||:.|           |....|.:|.| ||..|                 :..:.
Human  1769 SHLLCTRKPEQKQRW-----------LKAFAREREQV-QLDQE-----------------TGFSI 1804

  Fly   879 TYLERRNACRRSEIRQRNSKFK 900
            |.|:|:.|...:..:|...|.|
Human  1805 TELQRKQAMLNASKQQVTGKPK 1826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..713 CDD:279015 58/177 (33%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 38/167 (23%)
ARHGEF4NP_001354422.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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