Sequence 1: | NP_788403.2 | Gene: | GEFmeso / 37134 | FlyBaseID: | FBgn0050115 | Length: | 1549 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
Alignment Length: | 1065 | Identity: | 231/1065 - (21%) |
---|---|---|---|
Similarity: | 413/1065 - (38%) | Gaps: | 248/1065 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 438 VPIKLPTAEQLAELEEAN----KLSAESLD-RLTDIKPK---FAARLSELARLNNRPLSSSSICS 494
Fly 495 TSSSSSSG---SDQLLNGKLMATSYLASVESLAESENELGDQHHPPAMSVLEKTCLEIVDSERSF 556
Fly 557 VEDLGQVIKGYLQDW---KERACLRVDELQILFANIEEIYEFN-SMLLQRLINTGRDPGRIARCF 617
Fly 618 IDLRDGFDVYTTYCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYH 682
Fly 683 LLLDSL-----RKHCDVKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGIL-----DGWLGP 737
Fly 738 ELTVLGELRQEGLLMEQHNKQRLVLLFATMLIITKQKEDG---RLQFKTYISQNNLMLSEHLPGE 799
Fly 800 PTSFYVIPFDEPR---HQIKLTARNRDQKRIWTQHIKGVMLE------KLDIP-----------M 844
Fly 845 RAKELVYQL-GNEEDRTPDRSTWKWSLHS-GSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANS 907
Fly 908 SSFDSFNESLEQEEESISQAKPSKP---LAR-NNSLDDTALQK-LAAAMRYRKRDAAVKEETKTP 967
Fly 968 VKEPC-----KCD-QDAKQDERIEPCSCILRDQRSRSAKSQSPVFSYKALKERSKSVPRIGGFS- 1025
Fly 1026 ---------LDEEAEREREQDEDSAASLRGSK--PDLSERK-TKGKGFFEVKQYNHKTMPKK--- 1075
Fly 1076 ------IAN-----LKKQRSSTTKSCSRFYMD---LSEFDSSSSTVLKITESTEELRPDGEIE-- 1124
Fly 1125 ------------------LAQEAATLDE---------STQDQYYSPDHE-------------TEL 1149
Fly 1150 LSPAEKSKRDAQIVLDLLKNSKEFERIYNKQQKR--RESPVSPVSPDISRGPILPPPRPPSRSPP 1212
Fly 1213 PLELEEQ--EKKPVEE---------VDSVSE-------------EPI-----YETLLRNVHVPYK 1248
Fly 1249 FSPVLGRAKSSQILKKRSKTAPAASRPESDYVTLVYSPEGVLQRVGEEVVQRDSCSSSTTSTSSN 1313
Fly 1314 GSGSTLKRDSQSTVINLLMEAAQEH 1338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GEFmeso | NP_788403.2 | RhoGEF | 548..713 | CDD:279015 | 54/173 (31%) |
PH_PLEKHG1_G2_G3 | 694..839 | CDD:270063 | 33/161 (20%) | ||
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | |||
SPEC | 782..997 | CDD:238103 | |||
SPEC | 897..1119 | CDD:238103 | |||
SPEC | 1125..1226 | CDD:197544 | 10/46 (22%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 54/173 (31%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 29/134 (22%) | ||
PH | 1495..1580 | CDD:278594 | 22/84 (26%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 16/68 (24%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 32/192 (17%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 11/49 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462264 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |